Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05915 ATGGCTAAGGATCAGTTGCATGTGCTTAATGCACTTGATGTTGCCAAGACACAATGGTACCATTTCACAGCCATTGTGATTGCTGGGATGGGTTTCTTTACTGATGCCTATGATCTTTTCTGCATATCTCTTGTTACCAAATTGCTAGGCCGCATATACTACTATGAAGGCCCCACCAAGCCTGGCTCTCTACCATCCAATGTTTCTGCTGCCATCAATGGTGTTGCATTCTGTGGAACCCTTGCAGGCCAGCTTTTCTTTGGCTGGCTTGGTGACAAAATGGGAAGGAAACGTGTATATGGGATGACCCTTATGCTCATGGTGATATGTTCACTTGCTTCTGGTCTCTCTTTTGGAAAAGAACCTAAAGCTGTTATGGCTACCCTTTGCTTCTTCCGGTTCTGGCTTGGATTTGGAATTGGTGGTGACTACCCTCTTTCAGCCACTATCATGTCTGAGTATGCCAACAAAAAGACTCGTGGAGCTTTTATTGCTGCAGTTTTTGCCATGCAGGGTTTTGGAATTTTAGCTGGTGGCATGGTTGCAATTATAGTTTCATCTGCTTTCAGAGCCAAGTACCCTGCTCCAGCATTCCAAGTTGACCCAGTTTTGTCCACAGTTCCACAAGCTGATTATGTTTGGAGGATAATCTTGATGTTTGGTGCACTCCCAGCTCTTCTCACATACTATTGGAGGAATGCCAAGCAAGCAGCTGCAGATATGTCAAAAGTGCTGCAGGTTGAGATAGAAGCTGAACAGGACAAAATTCAGCATCTGGAAGGACAAGGAAGGAATGATTTTGGCTTGTTCTCAACACAGTTCCTTCACCGCCATGGACTTCACTTGGTTGGAACTGCTGTTACTTGGTTCCTGTTGGACATTGCCTATTATAGTCAGAATCTTTTTCAAAAAGACATTTTTAGTGCAATTGGGTGGATTGCAGAAGCTAAAACCATGAGTGCTATTGAAGAGGTTTACAAAATTGCTAGAGCACAGACACTCATAGCCCTTTGCAGCACTGTCCCTGGATACTGGTTCACAGTGGCACTCATTGATAGAATAGGAAGGTTTGCAATCCAATTGATGGGGTTTTTCTTCATGACTGTGTTCATGTTTGCCTTAGCCATTCCATACCACCACTGGACCATGAAGGGAAACCAAATTGGGTTTGTTGTGATGTATTCATTCACCTTCTTCTTTGCCAATTTTGGACCAAATGCCACTACGTTTGTGGTGCCAGCAGAGATTTTCCCAGCAAGGCTAAGGTCAACATGCCATGGTATATCAGCAGCAGCAGGGAAAGCTGGGGCAATGGTAGGGGCTTTTGGCTTCTTGTATGCTCAAAATGGCATTGGAGTGAGAAATACACTTATAATTTTGGGTGTGATTAACTTCTTGGGGATGATGTTTACATTCTTGGTGCCTGAATCTAAAGGAAAATCACTGGAGGAGATATCTGGTGAAGCTGAGGAAGAGACTACTACTGCTACAAGAGAATCAGCATTGGAGGCTGGTCTTCAAGTTTAG 1527 0.4401 MAKDQLHVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYEGPTKPGSLPSNVSAAINGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVICSLASGLSFGKEPKAVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGMVAIIVSSAFRAKYPAPAFQVDPVLSTVPQADYVWRIILMFGALPALLTYYWRNAKQAAADMSKVLQVEIEAEQDKIQHLEGQGRNDFGLFSTQFLHRHGLHLVGTAVTWFLLDIAYYSQNLFQKDIFSAIGWIAEAKTMSAIEEVYKIARAQTLIALCSTVPGYWFTVALIDRIGRFAIQLMGFFFMTVFMFALAIPYHHWTMKGNQIGFVVMYSFTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAMVGAFGFLYAQNGIGVRNTLIILGVINFLGMMFTFLVPESKGKSLEEISGEAEEETTTATRESALEAGLQV. 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05915 508 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 479 IPR020846 GO:0022857
Seca8g05915 508 Pfam Sugar (and other) transporter 25 486 IPR005828 GO:0016020|GO:0022857|GO:0055085
Seca8g05915 508 Gene3D MFS general substrate transporter like domains 20 502 IPR036259 -
Seca8g05915 508 SUPERFAMILY MFS general substrate transporter 11 486 IPR036259 -
Seca8g05915 508 CDD MFS_PhT 25 478 - -
Seca8g05915 508 NCBIfam phosphate:H+ symporter 11 488 IPR004738 GO:0005315|GO:0006817|GO:0016020
Seca8g05915 508 Coils Coil 242 262 - -
Seca8g05915 508 MobiDBLite consensus disorder prediction 483 497 - -
Seca8g05915 508 MobiDBLite consensus disorder prediction 483 508 - -
Seca8g05915 508 FunFam Inorganic phosphate transporter 1-6 20 500 - -
Seca8g05915 508 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05915 Seca-Chr8 152238547 152240118 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05915 1 487 Inorganic Solute Cotransporters AT2G38940 77.519 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05915 K08176 - gmx:100792711 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05915 8 152238547 152240118 Seca8g05915 8 152238547 152240118 ECH