Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05902 ATGTACATTCAACTGTGGTGCACTGAAAAAAAGGGGCCAGTTTTTGTCACAATGTTTAACCCTCTTTGTACGATATTTGTGGCAATTCTAGCATACTTTGTTTTTGGTGAAAAACTTCCTATGGGCAGCATCATAGGTGGAATTGTTGTCATCCTAGGCCTGTACTTGCTGTTGTGGGGCAAACAGGGCGATGGAGAGGTTGATATCAAGACCAAAAGTAAATCACAATGCAGTAGTACTGAAGACCCAGAATGCAGAATATAG 264 0.4129 MYIQLWCTEKKGPVFVTMFNPLCTIFVAILAYFVFGEKLPMGSIIGGIVVILGLYLLLWGKQGDGEVDIKTKSKSQCSSTEDPECRI. 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05902 87 Pfam EamA-like transporter family 3 58 IPR000620 GO:0016020
Seca8g05902 87 Gene3D - 7 62 - -
Seca8g05902 87 SUPERFAMILY Multidrug resistance efflux transporter EmrE 2 62 - -
Seca8g05902 87 PANTHER WAT1-RELATED PROTEIN 2 64 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05902 Seca-Chr8 151929711 151931430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05902 3 81 Nodulin-like Gene Family AT4G30420 46.835 8.36e-20 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05902 - - gmx:100527877 130.568