Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05901 ATGGAACAGAAAAGATTTTCTGTTTTGCTTGTATACAGAGAGTTCATGCCACACCTGCTCATGATCTTTGCTCAGGTGGGCTATGCCATTGTAAATTTTATTTGTGAAGCCTCCTTTAATCATGGGATGAGTCCTTATGTGTATGTAACCTATCGGCATGTTGTAGCTGGGGTTGTGCTGCTCCCTTTTGCATACTTTCTGGAGAGGAAAGTAAGGCCAAAGCTGACTTTTGCTCTTTTTGTGGAAATTTTTGTGCTTTCACTGTTAGGGGTCAGTTTGGTTCTTAATTTATACTTTGCAAGCCTGAAGTACACATCTCCAACCTTTGTTGTTGCCATGGTCAACACAGTATCTTCCCTTACCTTCATTATTGCAGTGGCATTCAGGTATGAGGTTGTTGATCTTCGAAAGCCCCGTGGTATAGCAAAAGTTCTAGGGACCTTGATCTCCTTAGCTGGTGTTATGACCATGACACTATACAAAGGACCTATTATAAAACGTTTATGGCATCCTCTGATCCATATTCAAGGAAAAAAGGCTGCTATCAATGAAAGCTGGTTAAAGGGTTCACTTCTTACAGTAACATGCTGTGTTATATGGTCTATATGGTACATAATGCAGGCAGCCACTTTGAAAAGATACCCTGCACAACTGTCACTGACGACGTGGATGTGCCTTCTTGGAGCAGCACAATCAGCTGTTTTCACGGTGGTAGCAGAACATAACTCTTCAGCATGGACTATAGGGCTCAACATTGACTTGTGGTCCACAATATATGGTGTTAAGTATTAA 792 0.4154 MEQKRFSVLLVYREFMPHLLMIFAQVGYAIVNFICEASFNHGMSPYVYVTYRHVVAGVVLLPFAYFLERKVRPKLTFALFVEIFVLSLLGVSLVLNLYFASLKYTSPTFVVAMVNTVSSLTFIIAVAFRYEVVDLRKPRGIAKVLGTLISLAGVMTMTLYKGPIIKRLWHPLIHIQGKKAAINESWLKGSLLTVTCCVIWSIWYIMQAATLKRYPAQLSLTTWMCLLGAAQSAVFTVVAEHNSSAWTIGLNIDLWSTIYGVKY. 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05901 263 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020
Seca8g05901 263 PANTHER WAT1-RELATED PROTEIN 17 260 IPR030184 GO:0016020|GO:0022857
Seca8g05901 263 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05901 Seca-Chr8 151927683 151929595 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05901 17 259 Nodulin-like Gene Family AT5G07050 45.059 4.48e-71 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05901 - - gmx:100527877 416.772