Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05822 CGTTGCCTCGCGCTCCGCCGATCGCCGTGTGTCTCTGCCTCCGTCTCCGTGGCTCTGCGTCTCTCCCTCCGTCTCTGTGGACTCGACGCATCTGCCTCCATCTCAGTGGACGCCATCTCCGCCGGCCTCTGCACTCGCACAGTCGAACGCACACTCGTGCTTTGCTTCCACCATTCTGCGCTTCTAGTTTTGTCAAAGCTAAGGCAAGTGGCTGTGTGGTTTCAAAACCGCAGGGCTAGATGGAAGACCAAGCAACTTGAGAGGGACTATGATGTTCTCAAGGCTTCCTATGATTCCCTACTTTCAACATATGAATCCATTACGAAGGAGAATGAGAAACTCAAATCTGAGATTTGGTTGCTCATGTATGCAATATGTAAATTGGGGAACACTAAAATGATTACAGCTGTGCATAAAAAGAGAAAAAAAGCTGCTCATAGCTCTGCTGAAAGGGAAAGGCACTGCTCTGAGCCGGCTGCATATTATGCGATCGATTGTCTGGTGGACTACAAGATTTCTAAAATTGGGTCAAATGCACTTAATATGGAATTGCAGTGTGATTCTTCCCTCATAGTCACATTACCCCATGCCTTTGATGAAGATCAACCTAAGGCATCAGGTCAGCGAAGCTATTATCTTAAGCTTAATTTTCAGCTTGGCATCAGGATAAGAATATACTTCCCCAGGGATGGTTCAAAGCTTACTCCTCCACATTGTTCAATAAACTTCTACTGGAAAGATTATCGCCCTATGGTCTTCAGGAATTTGAGAGAGATGTTCAAGTTAGATGCTGCAAAGTATATGATGCCCATTTGTGGAGATAGTGGTCTAAGGGACTTATCTTCTCTTGAAAAAAGTGGCAGCATCTTCTATCTATCTAAAGATGATAGATTTGTTATAAAGACACTGACAAAATCAGAACTAAAGGTGTGTAGTCACTTGAATTTACTTTTTGCATGGTGGATCAATAAATATTTCTATATTACTTTTTATTGA 996 0.4327 RCLALRRSPCVSASVSVALRLSLRLCGLDASASISVDAISAGLCTRTVERTLVLCFHHSALLVLSKLRQVAVWFQNRRARWKTKQLERDYDVLKASYDSLLSTYESITKENEKLKSEIWLLMYAICKLGNTKMITAVHKKRKKAAHSSAERERHCSEPAAYYAIDCLVDYKISKIGSNALNMELQCDSSLIVTLPHAFDEDQPKASGQRSYYLKLNFQLGIRIRIYFPRDGSKLTPPHCSINFYWKDYRPMVFRNLREMFKLDAAKYMMPICGDSGLRDLSSLEKSGSIFYLSKDDRFVIKTLTKSELKVCSHLNLLFAWWINKYFYITFY. 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05822 331 Coils Coil 97 117 - -
Seca8g05822 331 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 179 314 IPR023610 -
Seca8g05822 331 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 204 327 IPR027484 -
Seca8g05822 331 ProSiteProfiles 'Homeobox' domain profile. 68 84 IPR001356 GO:0003677
Seca8g05822 331 SUPERFAMILY Homeodomain-like 67 94 IPR009057 -
Seca8g05822 331 SUPERFAMILY SAICAR synthase-like 207 322 - -
Seca8g05822 331 CDD homeodomain 68 85 IPR001356 GO:0003677
Seca8g05822 331 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 272 314 IPR002498 GO:0016307|GO:0046488
Seca8g05822 331 Gene3D - 59 90 - -
Seca8g05822 331 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 182 331 IPR002498 GO:0016307|GO:0046488
Seca8g05822 331 SMART PIPK_2 213 327 IPR002498 GO:0016307|GO:0046488
Seca8g05822 331 Pfam Homeobox associated leucine zipper 84 121 IPR003106 GO:0006355|GO:0043565
Seca8g05822 331 Pfam Homeodomain 68 82 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05822 Seca-Chr8 150871319 150880280 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05822 207 310 Acyl Lipid Metabolism Gene Families AT1G10900 59.375 5.49e-42 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Seca8g05822 PIP5K 8.6e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05822 K00889 - gmx:100794706 176.792