Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05801 ATGCATAGCAAACGTTTCTTCCACCATCTCTCTATAACTGTTCTCACATCTTTCCAAAATCCCAAAGTGAAGCCACATTGTGTATATGACTTCAAATGGATCTTTGTCTATCTAGTTCTTTTTCCGTCTTTGGTTTTTGGTGATTGTACATGTAAACCAGATGATAATTCCGGTAACAAAAGTTTGGCTCGGAAATACAAAATAGCATCTATTGTTTCAATTTTGGTTGCAAGTGCATTAGGTGCCACAATTCCAATACTTGGGAAAACTTTCTCAGCCTTACGACCTGAGAAGGACTTTTTCTTCATCATCAAAGCCTTTGCAGCAGGGGTTATATTGTCCACTAGTTTCATCCATGTATTGCCTGATGCTTTTGAGAAGTTGACATCTCCTTGTCTTAGTGATCATCCATGGGGAGATTTTCCATTCACAGGATTCATGGCAATGTTATCCGCTATGGGAACACTTATGATTGATTCTTTTGCAACCGCATATTTTACTAAGTCTCACTTTAATGACAAGGGTCGAGTTGTAGACGAAGAAAAGGTGGAGGTACAAAATCATACCCATGGTCATGCTCATGGTTCGACTTCATCTAGTTCAAAAGATCTCATTCGTCGTCGTGTTATTTCTCAGGTGTTGGAGTTAGGGATTTTGGTGCATTCAGTGATAATAGGGGTCTCTTTGGGTGCATCTGAGAGTCCTGAGACTATAAAACCTCTTATTGCAGCTTTAACATTCCATCAATTTTTTGAAGGCATGGGGCTTGGTGGTTCCATCTCACAGGCAAAATTCAAGAACAAAGCAATTACAATTATGGTATTATTCTTTTCATTGACAACACCAGTAGGAATTGCAATTGGGATAGGGATTACAAATGCTTACAATGAGAATAGCCCAACTGCACTCATTGTGGAGGGAATTCTTAATGGAGCATCTGCTGGGATCTTGATTTACATGTCTCTTGTGGACTTTCTTGCGGCCGATTTTATGAGTCCAAAAGTCCAAGAAAGTGGTAGGCTTCAAATAGGAGTTAACGTGTCTCTTCTTCTCGGAGCTGATTGTATGTCACTTTTAGCTAAATGGGCCTAA 1092 0.3965 MHSKRFFHHLSITVLTSFQNPKVKPHCVYDFKWIFVYLVLFPSLVFGDCTCKPDDNSGNKSLARKYKIASIVSILVASALGATIPILGKTFSALRPEKDFFFIIKAFAAGVILSTSFIHVLPDAFEKLTSPCLSDHPWGDFPFTGFMAMLSAMGTLMIDSFATAYFTKSHFNDKGRVVDEEKVEVQNHTHGHAHGSTSSSSKDLIRRRVISQVLELGILVHSVIIGVSLGASESPETIKPLIAALTFHQFFEGMGLGGSISQAKFKNKAITIMVLFFSLTTPVGIAIGIGITNAYNENSPTALIVEGILNGASAGILIYMSLVDFLAADFMSPKVQESGRLQIGVNVSLLLGADCMSLLAKWA. 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05801 363 PANTHER ZINC/IRON TRANSPORTER 63 358 - -
Seca8g05801 363 Pfam ZIP Zinc transporter 66 360 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Seca8g05801 363 NCBIfam ZIP zinc/iron transport family 49 363 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05801 Seca-Chr8 150698666 150700435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05801 49 363 Inorganic Solute Cotransporters AT2G32270 58.095 2.39e-127 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05801 K14709 - qsu:112037227 461.84