Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05795 ATGTGGGAAGTGCTTACCGGTAGAAGAGATGGCACAATATCCAAAAGTAGTGAAGCTTTGGCCAATATCCCAGCACCTTTCTTCAACTTTGCCCAACTCAAACAAAGCTTTGCTAATAAAGGCCTTACTTTGCACGACCTCGTTGCAGTGGAGAAACATCGGTTGTTAGATCTTGGTATCTTCGTCCATCCCTTATTTGGAAGGATGGGAAATGGATTGAATCTTCCAAGGTGGGAGCAAATTAAATGA 249 0.4297 MWEVLTGRRDGTISKSSEALANIPAPFFNFAQLKQSFANKGLTLHDLVAVEKHRLLDLGIFVHPLFGRMGNGLNLPRWEQIK. 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05795 82 ProSiteProfiles Plant heme peroxidase family profile. 1 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g05795 82 Gene3D Peroxidase, domain 2 24 50 - -
Seca8g05795 82 PANTHER PEROXIDASE 25-RELATED 1 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g05795 82 SUPERFAMILY Heme-dependent peroxidases 2 49 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca8g05795 82 Gene3D - 2 23 - -
Seca8g05795 82 Pfam Peroxidase 2 49 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05795 Seca-Chr8 150623115 150623556 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05795 2 48 Peroxidase AT1G05260 61.702 1.10e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05795 K00430 - gmx:100806595 95.5153