Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05771 ATGCCAAGCACAAGAAATCTGAGGCACCTCAATCTCAATCTCAACATGTGTTTCTCAAATTCCACTACTCCTGAATCAAAATCCCCTCCTACAAGCCCTATTCATGCAACTTCCTCTCCATATGCATCAATAATGATCAAGAATTTCAACTCTCTCTATGACCCTATAGCTACCTCCACCACAACCTCCACTTCCTCCGAACCTGATCCCGAACCTGCTGACTTCGCCGCAGCCTTTGCCTCCCAACGCTTCTTCTTCTCCTCCCCTGGCCCTTCCAACTCTCTCACCAACTGCAACAAACACTCCTCACCATTGATCGCCACAAACACAAACGATGATAATCATAATCCAAATGGAGAAAGTGAAAAGAAGAACAAGAAGAACAAGAGCAAGAAGGCGTTGTTCAACGGAAGCGTGGCGGTGTCGACATACTCGCCGGATCCGTATCTGGATTTCCGGCGGTCGATGCAGGAGATGGTGGAGGCGCGTCCAGAACTAATGGATGTGAAGTCAAATTGGAAGATATTGCACGAGCTTCTTCTCTGTTACCTTGCGCTCAACCCAAAGAGCACACACAAGTTCATTCTGGGTGCTTTTGCTGATCTCCTTGTTAGCCTCATGCCATTCTAG 630 0.4762 MPSTRNLRHLNLNLNMCFSNSTTPESKSPPTSPIHATSSPYASIMIKNFNSLYDPIATSTTTSTSSEPDPEPADFAAAFASQRFFFSSPGPSNSLTNCNKHSSPLIATNTNDDNHNPNGESEKKNKKNKSKKALFNGSVAVSTYSPDPYLDFRRSMQEMVEARPELMDVKSNWKILHELLLCYLALNPKSTHKFILGAFADLLVSLMPF. 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05771 209 MobiDBLite consensus disorder prediction 97 115 - -
Seca8g05771 209 NCBIfam uncharacterized plant-specific domain TIGR01568 139 207 IPR006458 -
Seca8g05771 209 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 39 206 IPR038933 GO:0045892
Seca8g05771 209 MobiDBLite consensus disorder prediction 97 130 - -
Seca8g05771 209 ProSiteProfiles OVATE domain profile. 141 205 IPR006458 -
Seca8g05771 209 Pfam Transcriptional repressor, ovate 145 206 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05771 Seca-Chr8 150019430 150020092 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Seca8g05771 Ovate 3.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05771 - - aprc:113871147 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05771 8 150019430 150020092 Seca8g05771 8 150019430 150020092 ECH
Seca8g05771 8 150019430 150020092 Seca2g04267 2 127151604 127152404 PCT