Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05753 ATGGGTAACGTAGAGGACTATGCGTACCCTTCAGCCATGAACGTTGAGGAGAGCGCACACCGTGTGGCGGTTCCACCGCCTCAGCCGTTTTTCAAGTCACTAAAGTACTCTCTGAAGGAGACTTTTTTTCCAGATGACCCTTTGAGGCGGTTTAAGAACCAACCAGCCTCCAAGAGGTTTGTGCTAGGCCTTCAGTACTTCTTCCCAATCTTCGAGTGGGCACCAAACTACACCTTTCAGTTCATGAAATCTGACCTCATAGCTGGCATCACCATCGCTAGCTTGGCTATTCCTCAAGGCATCAGTTATGCTAAGCTCGCCAACTTGCCTCCAATTCTTGGACTATATTCGAGCTTCATACCACCGTTGATTTATGCGATGATGGGTAGTTCAAGGGATTTGGCAGTGGGGACTGTGGCCGTTGGATCTCTTCTTATGGGTTCCATGTTGGCGAATGAGGTTAATCCCAACCAAAACCCAAAGCTTTTCCTCCACCTTGCTTTCACAGCTACCTTCTTTGCTGGAATTTTGCAGGCTGCATTGGGTTTGTTTAGGTTAGGGTTTATCGTGGATTTCCTGTCACATGCAACCATAGTAGGGTTCATGGGAGGAGCAGCCACAGTGGTTTGTCTGCAGCAGCTAAAATCGATTCTTGGCCTTGAGCATTTCACTCATGCGGCTGATCTCGTTTCAGTCATGCGCTCTGTTTTTACTCAAATTCACGAGCAGTGGAGGTGGGAAAGCGCCGTGTTAGGATGTTGCTTCATTTTCTTCCTCCTTGTCACAAGATACTTCAGCAAAAAACAACCGAAGTATTTTTGGGTGTCAGCAATGGCGCCGTTGACGTCCGTTATATTGGGAAGTCTCCTGGTTTATTTCACTCACGCTGAGAATCACGGCGTTCAAGTGATAGGAAATTTGAAGAAGGGGCTAAATCCACTATCTCTCACAGATCTGGTATTTGTGTCGCCTTATATGAGCACGGCTATAAAAACAGGCCTTGTTGTTGGCATTATAGCACTAGCGGAAGGAATAGCAGTGGGAAGAAGCTTTGCAATGTTCAAAAATTACCATATTGATGGCAACAAAGAGATGATAGCTATTGGGACCATGAACATTGTTGGTTCTTTCACCTCTTGCTACCTCACAACAGGGCCATTTTCGCGTTCAGCCGTGAACTATAATGCTGGATGCAAGACTGCAGCATCCAACATTGTAATGTCAATTGCAGTCATGTTGACACTGTTATTCCTAACACCCTTGTTCTATTACACTCCTCTGGTGGTGCTATCAGCCATAATCGTATCTGCAATGCTTGGCCTCATAGATTATCAAGCAGCCATCCATCTGTGGAAGATTGACAAATTTGATTTTGTCGTGTGCATAAGTGCATATATTGGCGTGGTCTTTGGCAGTGTTGAAATTGGCTTAGTTATAGCTGTTGCAATATCTGTACTTCGGATACTACTATTTGTTGCAAGGCCAAGGACATTTGTTTTGGGCAACATTCCAAATTCTGTGGTATACAGAAATGTTGAGCAATATCCAAATGCAAAACATGTTCCTGGAATCCTAATTCTAGAGATTGATGCACCATTTTACTTTGCCAATTCAAACTATTTAAGAGAAAGGATCACAAGGTGGATTGATGAAGAGGAAGACAGAATTAAAGCTACAGGGGAAACATGTTTGCAGTATGTTATAATGGATATGAGTGTTGTTGGGAACATTGATACAAGTGGAATAAGCATGCTTGAAGAGGTCAAGAAAGTTGCAGATAGAAGAGGGCTACAACTTGTTTTGGTCAATCCTGGAAGCGAGGTGATGAAGAAACTAAACAAAGCTAACTTCCAAAAGGATATAGGGCAAAAATGGATCTATCTTACAGTTGAAGAGGCTGTTGGAGCATGCAACTTTATGCTCCATTCATGCAAAACGAATCTCAATAAAGATGGATCAGGGGGTTGGAACAATGTCTGA 1980 0.4359 MGNVEDYAYPSAMNVEESAHRVAVPPPQPFFKSLKYSLKETFFPDDPLRRFKNQPASKRFVLGLQYFFPIFEWAPNYTFQFMKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMGSMLANEVNPNQNPKLFLHLAFTATFFAGILQAALGLFRLGFIVDFLSHATIVGFMGGAATVVCLQQLKSILGLEHFTHAADLVSVMRSVFTQIHEQWRWESAVLGCCFIFFLLVTRYFSKKQPKYFWVSAMAPLTSVILGSLLVYFTHAENHGVQVIGNLKKGLNPLSLTDLVFVSPYMSTAIKTGLVVGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIVGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMSIAVMLTLLFLTPLFYYTPLVVLSAIIVSAMLGLIDYQAAIHLWKIDKFDFVVCISAYIGVVFGSVEIGLVIAVAISVLRILLFVARPRTFVLGNIPNSVVYRNVEQYPNAKHVPGILILEIDAPFYFANSNYLRERITRWIDEEEDRIKATGETCLQYVIMDMSVVGNIDTSGISMLEEVKKVADRRGLQLVLVNPGSEVMKKLNKANFQKDIGQKWIYLTVEEAVGACNFMLHSCKTNLNKDGSGGWNNV. 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05753 659 Gene3D STAS domain 494 639 IPR036513 -
Seca8g05753 659 SUPERFAMILY SpoIIaa-like 516 637 IPR036513 -
Seca8g05753 659 CDD STAS_SulP_like_sulfate_transporter 515 630 - -
Seca8g05753 659 Pfam STAS domain 515 633 IPR002645 -
Seca8g05753 659 PANTHER SULFATE TRANSPORTER 31 644 IPR001902 GO:0016020|GO:0055085
Seca8g05753 659 ProSiteProfiles STAS domain profile. 514 637 IPR002645 -
Seca8g05753 659 ProSitePatterns SLC26A transporters signature. 111 132 IPR018045 GO:0008271|GO:0008272
Seca8g05753 659 NCBIfam sulfate permease 69 633 IPR001902 GO:0016020|GO:0055085
Seca8g05753 659 FunFam Sulfate transporter 31 494 640 - -
Seca8g05753 659 Pfam Sulfate permease family 83 463 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05753 Seca-Chr8 149849665 149857472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05753 20 647 Inorganic Solute Cotransporters AT4G02700 68.203 0.0 902
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05753 K17471 - gmx:100791091 1145.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05753 8 149849665 149857472 Seca8g05753 8 149849665 149857472 ECH