Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05731 ATGACGACGGGTTTAGTAGGCGATCAGAACCTGGAAAAACACATTCACAAGCAGATGGGGTGCATGGCAGGTTTCCTTCAGATCTTCGATCGCCACCAGATTCTCTCCGGAAAACGCATCTACTCCGCCAAAAGACTCCCTCTCCCTCCCGTAGCATCGGATTCCTCGCCGGAATCGGAGAAACACGGTGAATCTCCGGCGCGCCCAGCACCTTCCCCTGCGAGAGAGGTTCAATCTGAAACGAAGGTAAACCTTCCCGCACTTCCCGTTCTTGAATTCAAGGAAGGCACCAGGTCTTCATGGAAGTTCTCCCGAGAGGCTCCCAGGCTCTCTCTAGATAGCAGAGCCGTGGTGGATGCTAAAGGAGGCCTTCACCCCAGAGAGATCCCAACCAAAACCACCATCCCCACCGAAAACGACGGAGACAAACAGCGTCGTTCCACCAGTGTGATCGCCAGGCTCATGGGGCTCGAGCCATTACAGGATTCGGATCCTGAATCGGGTGCGAAGCTCCGAAGATCCGCGTCGGAGTCGAGAGTCTCCAGAGATCTGCCACAGTGTCGCTTCTTGGAGTCCAAGCTAAACAATTTTCAGTTGCAGCCAAACTCTCAACATAGCAATGTGGCCCAGGAGAGTAATGTGAATGTCAATGTTGTTTCAGCTGCTATGGATAATCATCGATTATCCAATGGCAGAGCTACAGAAACAGGCAGAGGTCCCATTCCACTGCGGCAAAGGGGAACAATGACACAAAAGAAGAGTTTCTATGACTCTGCTGACTTCTTCCCTGAACCGAAGGACACCGTTTCCATCTATGGAGTGATTGAGAAGAGGCTCAGGATGCGAGGGATTAACCAGCCTTCTCAGGATCTCCACACTCTCAAGAATATCTTGGAAGCTCTGCAGCTCAAAGGCCTTCTTCATTCCGACAAACCCAACCATTCTCCCATCGTCGTCATGAAACCGACCAGATCTTCCGGTCCCTTGAACCGAACCGGAAATGATTCTCCACCTCCACACTCGACTCTCCGGTCCAGTCCTCGGGCTCGCCGGAGCCCGAGCCCGAGCCTTACCAGTGAGACTGACCGGAGCATCAGGACTCAATCCAGAGCCAAAAACTCGAGCCCGAACCGGAGAAGAGTCCCAAGTGTGGAGACGCAGAGGAAAGTGAGTAATGACGGTGTTGATTCGAGAAGGGTGTCTCCGGTTAATTCGCCCAAGATAAGCTCAAGAAGAAATGCAACAACGGGTCAGGTTGTGACAAGTGGATCGCCCAGGATGAGAAAAGTGATTGATCCTAAGGTGAAGGTGTTGGGTGGGGCAGAGGATGAAATATCCACCGTTTCAGAGAATAGCTTCAGCACCTCTTCACATACAGATACAGAGAGGTACAAGTTGGAAGAGTACAAGGAAGGGAGGAATCTGCTGGATAGGTGTGATAAGCTGCTCAACAGTATAGCGGAGATAACAGCAGTGAACGAGTTGCAACCGAGTCCTGTATCGGTGCTTGACTCATCATTCTACAGGGATGAGTGGTGTTCACCTTCCCCAATAACCAAACGGTGCATTGATTACAAAGGTGAGTGA 1587 0.5148 MTTGLVGDQNLEKHIHKQMGCMAGFLQIFDRHQILSGKRIYSAKRLPLPPVASDSSPESEKHGESPARPAPSPAREVQSETKVNLPALPVLEFKEGTRSSWKFSREAPRLSLDSRAVVDAKGGLHPREIPTKTTIPTENDGDKQRRSTSVIARLMGLEPLQDSDPESGAKLRRSASESRVSRDLPQCRFLESKLNNFQLQPNSQHSNVAQESNVNVNVVSAAMDNHRLSNGRATETGRGPIPLRQRGTMTQKKSFYDSADFFPEPKDTVSIYGVIEKRLRMRGINQPSQDLHTLKNILEALQLKGLLHSDKPNHSPIVVMKPTRSSGPLNRTGNDSPPPHSTLRSSPRARRSPSPSLTSETDRSIRTQSRAKNSSPNRRRVPSVETQRKVSNDGVDSRRVSPVNSPKISSRRNATTGQVVTSGSPRMRKVIDPKVKVLGGAEDEISTVSENSFSTSSHTDTERYKLEEYKEGRNLLDRCDKLLNSIAEITAVNELQPSPVSVLDSSFYRDEWCSPSPITKRCIDYKGE. 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05731 528 MobiDBLite consensus disorder prediction 397 423 - -
Seca8g05731 528 MobiDBLite consensus disorder prediction 47 83 - -
Seca8g05731 528 MobiDBLite consensus disorder prediction 123 179 - -
Seca8g05731 528 PANTHER LONGIFOLIA PROTEIN 1 63 IPR033334 GO:0051513
Seca8g05731 528 MobiDBLite consensus disorder prediction 308 423 - -
Seca8g05731 528 MobiDBLite consensus disorder prediction 165 179 - -
Seca8g05731 528 MobiDBLite consensus disorder prediction 325 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05731 Seca-Chr8 149541456 149544163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05731 101 525 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 34.732 3.12e-44 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05731 - - lja:Lj5g3v1014900.1 662.914