Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05730 ATGGCGGAGGAGATGAGTGGATGGGGTGAATGGCCAATGGAGATGGGAGATGTCGTTTTGGACATAGAACGCCTCGTTTTCAAAGATCTAATTGGCGAAACCATACGACACCTCGCTTCATTTGCCCCTCAATGTAACAGTGTATCCGCGCTTCGTAGGAAGCTCCTCTTTTGA 174 0.4885 MAEEMSGWGEWPMEMGDVVLDIERLVFKDLIGETIRHLASFAPQCNSVSALRRKLLF. 58
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05730 57 PANTHER LONGIFOLIA PROTEIN 2 57 IPR033334 GO:0051513
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05730 Seca-Chr8 149541200 149541373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05730 8 57 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 56.000 2.94e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05730 - - ccaj:109813941 98.9821