Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05702 ATGGAAGAGGTTGAACAAGCTAACAGAGTAGCTGTTGAAAGCTGTCATAGAGTTCTAAGTTTGTTGTCTCAGCCCCGGGATCAGGTTCAGCATAGGAATTTAATGGTGGAAACTGGGGAAGCTGTGGTGAGGTTCAAGAAAGTTGTTTCCTTGCTTCATAATGGTTTGGGTCATGCAAGATTCAGGAAGTCTAAAAAACTTCAAGTCCCCTTTTCCCAAAGTATCCTCTTAGACAACCCAAATTGCAAAACCAACCATCACTCAAAAAATCTGCAGTTTCCCCAAACCAACTTCCCTGACAATTCAATCCAGGAACTGGGCTCAACCATAAAAAATTCACTGTCTCTGGGAAACCCATCTTTGGAATTAAGCTCCAATGGGAAAAGTCCTCTTCACCTTACCCAACAAGCTTCATCAACTCACTATCACTTCTTACAGCAGCAGCAACAACAAAGATTGTTGCTGCAGCAGCAGCAGCAACAAATGAAGCATCAAGCAGAAATGATGTTCCGAAGGAACAATAGTAGTGGCATAAACCTGAATTTTGACAGCACTAGCTGCACACCAACAATTTCATCTACTAGGTCTTTCATGTCTTCCTTGAGCATAGATGGAAGCGTAGCTAACTTAGATGGAAGTGCCTTCCATTTAATAGGAGCTCCACACTCTTCTGATCAGAATTCGCAGCAGCATAAGAGAAAATGTTCTGCCAAAGGTGATGAGGGCAGCTTGAAATGTGGGAGCAGTTCTAGATGCCATTGCTCAAAGAAGAGGAAACATAGAGTGAAGAGATCAATTAAGGTGCCTGCCATCAGCAACAAACTTGCAGATATCCCTCCCGATGATTATTCATGGAGGAAGTACGGGCAGAAGCCAATCAAGGGCTCTCCTCACCCTAGGGGATATTATAAGTGTAGCAGCATGAGAGGCTGTCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGAAGAGCCTACCATGCTAATTGTTACTTATGAAGGCGAGCATAACCACCCTAAGTTACCAGCACAATCAGCAAATGCATGA 1044 0.4377 MEEVEQANRVAVESCHRVLSLLSQPRDQVQHRNLMVETGEAVVRFKKVVSLLHNGLGHARFRKSKKLQVPFSQSILLDNPNCKTNHHSKNLQFPQTNFPDNSIQELGSTIKNSLSLGNPSLELSSNGKSPLHLTQQASSTHYHFLQQQQQQRLLLQQQQQQMKHQAEMMFRRNNSSGINLNFDSTSCTPTISSTRSFMSSLSIDGSVANLDGSAFHLIGAPHSSDQNSQQHKRKCSAKGDEGSLKCGSSSRCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPTMLIVTYEGEHNHPKLPAQSANA. 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05702 347 Gene3D WRKY domain 265 341 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca8g05702 347 Pfam Plant zinc cluster domain 232 277 IPR018872 -
Seca8g05702 347 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 345 IPR044810 GO:0003700
Seca8g05702 347 MobiDBLite consensus disorder prediction 220 241 - -
Seca8g05702 347 Coils Coil 145 165 - -
Seca8g05702 347 Pfam WRKY DNA -binding domain 281 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca8g05702 347 SUPERFAMILY WRKY DNA-binding domain 277 339 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca8g05702 347 FunFam WRKY transcription factor 65 263 340 - -
Seca8g05702 347 SMART WRKY_cls 279 339 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca8g05702 347 ProSiteProfiles WRKY domain profile. 274 340 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05702 Seca-Chr8 148820365 148823502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05702 1 344 WRKY Transcription Factor Family AT2G30590 58.225 4.68e-131 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca8g05702 WRKY 4.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05702 - - gmx:100170681 591.652