Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05690 ATGGAACTTGAAACCATACTTCCTTTCCTTCTTTTCTTTACAACCCTCCTTTACTTCGTAGTCACAACATTACCAAAACCCAAAACCACACCCTCTTCTTCCACCACCGCTTCAATTCCCAAAGCTTACCCCATCATCGGTTCCGCGTTTTCGATCGCATCCAACTTCCACAGGCGCGTGCAATGGATCTCCGACATCCTCCACACAACCCCTTCCTCCACCTTCGTCCTCCACCGCCCCTTCGGCAACCGCCAAGTTTTCACGGCGAATCCCGCCGTGGTCCAGCACATTCTCAAGACCAACTTCCCTTGCTACCACAAGGGCCCCACCTTACACCGAGCCCTCGGTGACTTCCTCGGCAACGGAATCTTCAGCGCCGACGGTGACAACTGGAAGTTCCAGCGAAAAATCTCCAGTAACGAGTTCAACACACGATCCCTCCGCAAGTTCGTTGAAACCGTCGTCGATGAAGAGCTCTCCAATCGCCTCCTTCCTATTCTCTCCGAAGCTTCTCTCAACAAAACCACCCTCTCAAACTTCCAAGACATCCTCCAACGCTTCACCTTCGATAACATCTGCAGAATCGCCTTCGGTTTCGATCCGGAGTACCTCCTCCCTTCCCTCCCCGAAACCGCGTTCGCTAAGGCCTTCGACGACGGCACAAGAATCAGCAGCGAGAGGTTCAACGCAGCGTTTCCATTGTTCTGGAAGGCGAAGAAGTTCCTCAACGTTGGTTCAGAGAAAAGGCTTAAAGAGGCCATCGCTGAAGTGAAAGGCCTCGCGGGGAAAATCGTGAGGGAGAAGAAAGAGGAGCTTCGAGAAAAATCAGCTTTGGAATCGGTGGATCTTTTATCGCGGTTTTTGAATTCTGGCCATTCGGATGAAGCTTTTGTGACGGATATAGTGATAAGCTTTATTCTAGCAGGAAGGGACACTACCTCTGCAGCACTCACGTGGTTCTTTTGGCTACTCTCTAACCACCCTCACGTGGAGAAGAAGGTTCTGGAAGAGGTTAAGGGAAAATCCGAAGCGGTTGTGTATGATGAAGTTAAAGATATGGTTTACACGCATGCCGCGTTGTGTGAGAGTATGAGGCTGTACCCGCCTGTGCCAGTGGATACTAAAGAGGCAGCGTACGACGACGTTTTGCCAGATGGGACTTTCGTGAAGAAAGGGACCCGAGTGGCGTATCATATCTATGCTATGGGAAGGTCCGAGAAGTTATGGGGACCCGATTGGGCTGAGTTTCGACCCGAGAGGTGGTTGAATCGGGTTGAGGAGGATGGGAAATGGAGCTTCGTGGGGGTGGATTCTTTTACTTATCCGGTGTTTCAGGCTGGGCCAAGGGTGTGTTTGGGAAAGGAAATGGCGTTCTTGCAGATGAAGAGGGTGGTGGCTGGGATTATGAGCCAGTGCAGGGTGGTTCCGGCTATAGAGGAAAGGGTGGAGCCTGAGTACACTGCGCACCTTACCTCCTTGATGAAAGGTGGGTTCCCGGTAAGGATTGAGAAGCTCAGTCACACAGATGAATGA 1533 0.5147 MELETILPFLLFFTTLLYFVVTTLPKPKTTPSSSTTASIPKAYPIIGSAFSIASNFHRRVQWISDILHTTPSSTFVLHRPFGNRQVFTANPAVVQHILKTNFPCYHKGPTLHRALGDFLGNGIFSADGDNWKFQRKISSNEFNTRSLRKFVETVVDEELSNRLLPILSEASLNKTTLSNFQDILQRFTFDNICRIAFGFDPEYLLPSLPETAFAKAFDDGTRISSERFNAAFPLFWKAKKFLNVGSEKRLKEAIAEVKGLAGKIVREKKEELREKSALESVDLLSRFLNSGHSDEAFVTDIVISFILAGRDTTSAALTWFFWLLSNHPHVEKKVLEEVKGKSEAVVYDEVKDMVYTHAALCESMRLYPPVPVDTKEAAYDDVLPDGTFVKKGTRVAYHIYAMGRSEKLWGPDWAEFRPERWLNRVEEDGKWSFVGVDSFTYPVFQAGPRVCLGKEMAFLQMKRVVAGIMSQCRVVPAIEERVEPEYTAHLTSLMKGGFPVRIEKLSHTDE. 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05690 510 Coils Coil 250 270 - -
Seca8g05690 510 Pfam Cytochrome P450 40 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05690 510 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05690 510 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05690 510 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05690 510 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05690 510 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05690 510 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05690 510 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05690 510 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05690 510 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05690 510 SUPERFAMILY Cytochrome P450 40 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05690 510 Gene3D Cytochrome P450 29 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05690 510 PANTHER CYTOCHROME P450 24 500 - -
Seca8g05690 510 CDD CYP86A 74 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05690 Seca-Chr8 148657476 148659008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05690 10 509 Cytochrome P450 AT5G63450 47.117 1.46e-150 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05690 K20769 K20768 ag:AAG33645 740.725