Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05665 ATGGGTACCAACTTGCACCAACTACTCAAAAGCCTCTGTTTGAGTACTGATTGGAAGTATGCTATCTTTTGGAAGCTACAACATCGTGCTCGGATGGTCTTGACATGGGAGGATGCTTACTATGACAATCCTGATCATTATGACACTTCCGAAAATAAGTACTGCCAGAAGACCTTGGAGCAGATTGGCAGTGGGGATTTTTCACATGACCCTCTAGGGTTAGTTGTGGCAAAGATGTCATATCATGTATATTCATTAGGGGAAGGTATTGTTGGACAGGTAGCTGTTACTGGAAAGCATCAGTGGATCTGTGTAGATAATCAAGTTACAAGTTCTAGCGCATCTTTTAAGTCTGCTGATGGGTGGCAATCCCAGTTTTCTGCTGGAATTAGGACCATTGTTGTTGTAGCGGTAGTCCCACTTGGAGTTGTTCAGATTGGTTCGTTAAATAAGGTTATTGAAGATATGGGTGTTGTAACTCATATCAGAAGTCTCTTTTTGTCTACTCAAGATTACACTGTAGGCTATCTTCCTAGTCAAATACAAAGTGGTGTGAAGAATTCTTCATCTCTGCTGGATGTATCCACGAAAGCGTTGTCTTCAGAAATTATGCCTGCTCACTTGCATGATATAGAGAAAACCATGAAGAGTGAAACACTGGATATTTTAATGCCCTTCCAATGTCATGGGAAGAACTGTCCACCTCATACCGTTTATCATGAAATGGCTGTTGATGTGGCCAAGCATGAGGGACCTGAATTTAACAGTGCTGAAAGTTCGATTTTGCTTCAGTCAATGTCAAATATGATGAATGCAGAGCATCAGAAATTTGTAGGGATGAGGCCTGTAGATGAGAGGAAGTGTGAAGGGAACAATAATGGGTGCAAAGATACAAGTTTGAAATCAGAAAAAAATGTCTCATCATTTTTACACAATTTGGTCCTGGATAATAATAGCATGAGTCCATTAGAAAAAGTCGGAGTTGATCCTGCATGCTTCCCTTCAGACTTTCTTGATGCAGTTGCTTGTGAGAGTGATAAGTTACATTATGTAGATATCAATCAACAAGGGATGTTGAATGTGCCTAGACATTCAGATGCAAACTCCCAAAAAGATACTGAGAAGTCAAAGTTTCAGACTGAGTCTTGTTATGAGGATACCTCATATACATTGAAGTTCCCTGCTGGCTATGAGCTACATGAAGCACTTGGACCAGGTTTCCTGAACGGGAGTAGATATTTTGATTGGGAGGCACAAACAAATCAAGATGTTAAAACTGCTGAGATGTCAGATGAGATTAGCTGTAGCCAATTGACTTCTGAATCTCGTCCAGAGCATCTTTTGGAAGCAATGGTCACTAATGTTTGCCATAGTAATAATTGTGTTAATAGTGAGTCATCATTTTCTACATCAATGCAGACTGCAATGACCTCCGCAAGAAATCCTGAAACTTCCATTCATACTGTACACACTATTAATTCAGAAGGATATTCAATAGATCGACCCTCCAATGTTAGAGGGGACAAACAACAAAGTTTGAGTTCATCAGGGATATGCGGTGTGATGTCCCCAAAAGCTCTTTCTTCTACATGTCCTAGTTCTTCATGTTCCAAACAGTTTGAGAGGTATTCTGAACCAGGTAAAAACAGTAAGAAGAGGGCTAAGCCTGGGGAAAGTTGTAGGCCTAGGCCAAGGGACAGGCAGCTGATCCAAGACCGTATTAAGGAGTTACGAGAACTGGTTCCAAATGGAGCAAAGTGCAGTATTGATTCACTGCTGGAGTGCACAATAAAGCACATGCTCTTTCTCCAAAGCATAACTAAGCATGCCGACAAGCTAAATAAATATGCTGATTCAAAGACAAAGTTTCATCACATGGAAAAAGACATTCTAGGATCATCTGGTTATCAACAGGGTTCAAGTTGGGCAATGGAGGTAGGAGGCCATCTGAAAGTTCATTCAGTATTAGTGGAGAATCTTAGTAAGAACGGGCAGATGCTTGTTGAGATGCTGTGTGAGGAGTGCAGTCATTTTCTTGAGATAGCAGAAGCCATAAGAAGCTTAGGCCTGACAATTTTGAATGGTGCAACAGAAGCTCATGGTGAGAAGACATGTATATGTTTCGTGGTTGAGGTAGGATCAGAAGGCCAAAACAACAGAAATTTACACAGATTGGATATCTTGTGGCCGCTTGTTCAATTACTGCAATCCAAGAGCACAATGTATTCATGA 2232 0.4086 MGTNLHQLLKSLCLSTDWKYAIFWKLQHRARMVLTWEDAYYDNPDHYDTSENKYCQKTLEQIGSGDFSHDPLGLVVAKMSYHVYSLGEGIVGQVAVTGKHQWICVDNQVTSSSASFKSADGWQSQFSAGIRTIVVVAVVPLGVVQIGSLNKVIEDMGVVTHIRSLFLSTQDYTVGYLPSQIQSGVKNSSSLLDVSTKALSSEIMPAHLHDIEKTMKSETLDILMPFQCHGKNCPPHTVYHEMAVDVAKHEGPEFNSAESSILLQSMSNMMNAEHQKFVGMRPVDERKCEGNNNGCKDTSLKSEKNVSSFLHNLVLDNNSMSPLEKVGVDPACFPSDFLDAVACESDKLHYVDINQQGMLNVPRHSDANSQKDTEKSKFQTESCYEDTSYTLKFPAGYELHEALGPGFLNGSRYFDWEAQTNQDVKTAEMSDEISCSQLTSESRPEHLLEAMVTNVCHSNNCVNSESSFSTSMQTAMTSARNPETSIHTVHTINSEGYSIDRPSNVRGDKQQSLSSSGICGVMSPKALSSTCPSSSCSKQFERYSEPGKNSKKRAKPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLECTIKHMLFLQSITKHADKLNKYADSKTKFHHMEKDILGSSGYQQGSSWAMEVGGHLKVHSVLVENLSKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILNGATEAHGEKTCICFVVEVGSEGQNNRNLHRLDILWPLVQLLQSKSTMYS. 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05665 743 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Seca8g05665 743 MobiDBLite consensus disorder prediction 528 566 - -
Seca8g05665 743 MobiDBLite consensus disorder prediction 544 566 - -
Seca8g05665 743 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 554 603 IPR011598 GO:0046983
Seca8g05665 743 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 741 IPR043561 GO:0003700|GO:0006355
Seca8g05665 743 MobiDBLite consensus disorder prediction 528 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05665 Seca-Chr8 148377176 148383322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05665 1 739 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 42.561 7.77e-165 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05665 - - gmx:100777740 1126.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05665 8 148377176 148383322 Seca8g05665 8 148377176 148383322 ECH
Seca8g05665 8 148377176 148383322 Seca2g04359 2 128464862 128475066 PCT