Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05662 ATGTCTAACAATGAAGGTGCATTCAGGGTGGTATGTAGGAAATTTAGGCCTCACCTTTTCATGGTTCTGGTTCAGGTGGCTCTTGCACTTCTCTATTTCCTAGTAGAGGCTTCATTTAATAATGGGATGAACCCTCATGTTTTTGTTACTTATCGGTATGCTGTTGGGGGCATGGTAGCACTTCCTTTTGCTTATGTTTTTGAAAGAGAAACAAGGCCAAAGTTGACAATGCCACTGTTCATGGAGCTATTTTTGGTTTCCCTCTTCGGATCTAACCAAATCTGGAAAAAAGCTTACATTTCTTTGTTTCCCTTTACAATGAAAAACAGAATCAGTCTTACCCTGAACGTGTTTTTTGCAAGTTTGAAATATACCACTCCTTCCTTTGTCACATCCATGATCAACACAATATCATCTCTTACATTTATATTTGCAGTTGGATTCAGGCTAGAGGCTGTTGATGTTAAGAACCCTCGTGGTCTAGCTAAAATCTTTGGAACTGTGTTATCTTTGACTGGTGCCCTGATAATGATTTTGTATAAAGGACAAACAATACAAAGCTTTCAAGGTGCCCCATTCCATATCACGAGCAAAATGACTCATAATAACTGGATTAAAGGATCAATTTTGACTGTTACAAGCTGCATATCATGGTCTCTATGGTATATACTGCAGGCAGTTACAGTGAAGAAATATCCAGCTCAACTGTCACTAACAGCATGGATAAATTGCATTGGTGCAGCACAGTCTGCTGCCTTTACTTTACTAATCCAACACAAACCTAGAGCATGGTACATTACATCCAGTATGGAACTCTGTTGCATTTTATACTCTGGAGTTATATGTGGCAGTTTGACTATCTACCTTCAGATCTGGACCACCGTACAAAAAGGGCCAGTCTTTGTGAGTATGTTTAATCCCCTTGGAACAATTTTGGTGGCAATCCTAGAATATTTTGTTTTTGGACAACAACTCCACATGGGCCTAATTCTGGGAGTTGTGGTTGTTATCATTGGTCTATACTCGCTATTATGGGGAAAAGAAAACCAGCCACAACAATGTTTTCAAAAACATGTTGAACTGAAAGAATGTAGGACACAGATAAAGACTTCAGCTGAGGAAGATGTAGCAAAAAGGGAACCAAGCACATAA 1152 0.3915 MSNNEGAFRVVCRKFRPHLFMVLVQVALALLYFLVEASFNNGMNPHVFVTYRYAVGGMVALPFAYVFERETRPKLTMPLFMELFLVSLFGSNQIWKKAYISLFPFTMKNRISLTLNVFFASLKYTTPSFVTSMINTISSLTFIFAVGFRLEAVDVKNPRGLAKIFGTVLSLTGALIMILYKGQTIQSFQGAPFHITSKMTHNNWIKGSILTVTSCISWSLWYILQAVTVKKYPAQLSLTAWINCIGAAQSAAFTLLIQHKPRAWYITSSMELCCILYSGVICGSLTIYLQIWTTVQKGPVFVSMFNPLGTILVAILEYFVFGQQLHMGLILGVVVVIIGLYSLLWGKENQPQQCFQKHVELKECRTQIKTSAEEDVAKREPST. 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05662 383 PANTHER WAT1-RELATED PROTEIN 18 350 IPR030184 GO:0016020|GO:0022857
Seca8g05662 383 Pfam EamA-like transporter family 206 344 IPR000620 GO:0016020
Seca8g05662 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 263 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05662 Seca-Chr8 148336991 148339466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05662 9 376 Nodulin-like Gene Family AT2G37460 34.584 1.32e-73 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05662 - - gmx:100808275 531.561