Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05633 ATGGCCAAGGAGCAAATGCAAGTGCTAAATGCACTTGATGTGGCTAAGACACAATGGTACCATTTCACAGCAATCATCATTGCTGGAATGGGCTTCTTCACTGATGCCTATGATCTTTTCTGCATATCACTTGTTACAAAGCTACTTGGCCGTATATATTACCACGTTGATGGCGCAGAAAAGCCTGGCACATTGCCTCCTGATGTATCAGCTGCTGTAAATGGTGTTGCTTTTATTGGCACACTTTCTGGGCAACTCTTCTTTGGCTGGCTCGGTGACAAAATGGGCCGAAAAAAAGTCTATGGCATGACCCTGATGTTGATGGTACTATGCTCCGTTGCTTCAGGTCTTTCCTTTGGACGTGAACCTAAGACAGTGTTGGTGACTCTTTGCTTTTTCCGGTTCTGGCTTGGTTTTGGTATTGGTGGAGACTACCCACTTTCTGCTACCATAATGTCTGAGTACTCTAATAAGAAGACTCGTGGTGCTTTTATAGCTGCAGTGTTTGCCATGCAGGGTTTTGGAATTTTGGCAGGAGGTGTATTTGCAATCATAATTGCATCTGCATTTAAGGCCTGGTTTGATGCTCCACCATATGAGGTTGATCCTTTGGGTTCAACTGTTCCACAAGCAGACTTTGTTTGGAGGATAATCTTGATGGTTGGAGCACTTCCAGCTGCATTGACTTACTACTGGAGAACCAAGATGCCAGAAACTGCCCGTTACACTGCTCTTGTTGCTAAGAATATGGAGCAGGCTGCAGCAGATATGTCTAAGGTTATGCAAATGGATATTCAAGCTGAACCGAAGAAGGAGGAGCAGGTACAAAGTAAAAACTCATATGGATTGTTCTCCAGTGAGTTCCTCAAGAGACATGGACTGCATCTACTTGGAACAACAAGCACATGGTTCTTGCTTGATATTGCATTTTACAGTCAGAACCTCTTCCAAAAGGATATCTTCAGTGCAATTGGTTGGATTCCTCCTGCTAAAACCATGAATGCCCTTGAGGAGGTTTACAAAATTGCAAGGGCTCAAACGCTTATTGCTCTCTGCAGTACAGTCCCAGGCTATTGGTTCACAGTGGCCTTCATTGACAGGATAGGAAGATTTACTATTCAGTTGATGGGGTTCTTCTTTATGACAGTCTTTATGTTTGCTCTTGCCATTCCTTATGATCACTGGACTCATAAGAACAACAGAATTGGGTTTGTGGCGATGTATTCCTTGACCTTCTTCTTTGCAAACTTTGGGCCTAATGCTACAACATTTGTTGTGCCAGCAGAGATTTTCCCAGCTAGATTCAGGTCCACTTGCCATGGAATATCATCAGCATCAGGGAAACTTGGGGCTATGGTTGGTGCATTTGGATTCTTGTATTTGGCACAAAACCAGGACAAGAGCAAAACAGATGCAGGGTACCCTGCAGGTATTGGTGTGAGGAACTCACTGCTTTTGTTAGGTGTGGTTAACATTTTGGGGTTCCTCTTTACTTTCTTGGTGCCTGAGGCAAAGGGAAAATCTCTGGAGGAGATCTCTGGTGAGCAAGAAGAGGAACAAGAAACCAAGGTATAA 1575 0.4394 MAKEQMQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGTLPPDVSAAVNGVAFIGTLSGQLFFGWLGDKMGRKKVYGMTLMLMVLCSVASGLSFGREPKTVLVTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGVFAIIIASAFKAWFDAPPYEVDPLGSTVPQADFVWRIILMVGALPAALTYYWRTKMPETARYTALVAKNMEQAAADMSKVMQMDIQAEPKKEEQVQSKNSYGLFSSEFLKRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKTMNALEEVYKIARAQTLIALCSTVPGYWFTVAFIDRIGRFTIQLMGFFFMTVFMFALAIPYDHWTHKNNRIGFVAMYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAMVGAFGFLYLAQNQDKSKTDAGYPAGIGVRNSLLLLGVVNILGFLFTFLVPEAKGKSLEEISGEQEEEQETKV. 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05633 524 Gene3D MFS general substrate transporter like domains 20 524 IPR036259 -
Seca8g05633 524 NCBIfam phosphate:H+ symporter 11 515 IPR004738 GO:0005315|GO:0006817|GO:0016020
Seca8g05633 524 CDD MFS_PhT 25 505 - -
Seca8g05633 524 FunFam Inorganic phosphate transporter 1-6 20 524 - -
Seca8g05633 524 Pfam Sugar (and other) transporter 26 513 IPR005828 GO:0016020|GO:0022857|GO:0055085
Seca8g05633 524 SUPERFAMILY MFS general substrate transporter 12 514 IPR036259 -
Seca8g05633 524 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 506 IPR020846 GO:0022857
Seca8g05633 524 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05633 Seca-Chr8 147954399 147955973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05633 1 521 Inorganic Solute Cotransporters AT3G54700 84.069 0.0 922
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05633 K08176 - gmx:100786638 935.636
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05633 8 147954399 147955973 Seca8g05633 8 147954399 147955973 ECH
Seca8g05633 8 147954399 147955973 Seca8g04298 8 122777757 122780223 PCT
Seca2g04375 2 128756657 128758279 Seca8g05633 8 147954399 147955973 PCT