Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05623 ATGGTTTCGCTATCAACATGGTTTCGGTACTTTCTTTACAAGGCAGAATACTCCATCTCTCTCGGCTTGAGGAGCAGTAAAGGAGGTCAAATTACAGGAGAGACACGTGATGTTGTTTGCAAGAACTTCTTTCAAGGAAAGTTGACCTACTTGCACTGGAATAAAGGAGAGGAGATGGCCCCTACTATTGCTGGAAAAGGAGCAACTCTTCTTGTTCGGAAATTACCAATTGCAGATCCAACGAGTGTTTTTGTAGGAGACGTTGTGGTCGTGAAGGACCCTGAGAAGCCAGATAACTACCTAGTCAGAAGATTAGCTGCCATTGAAGGTTATGAAATGGCTTCTACTGATGAAAAGGATGAACCTTTTGTTCTCGAGAAGGATCAATGCTGGATAGTGGCTGAAAATGAAAAATTGAAAGCTAAGGAAGCAAATGATAGTCGAACGTTTGGTCCAGTTCACATGACAGACATTGTAGGCAGAGTCATATACTGCCTACGAAGTGCAGTAGACCATGGTCGTATACAGAACAGTTATTTCAGCATGCGAAAGGATTCACCAGTGTTGGAAGTGGAACTTGATGTTGATGAGATGGCAAAGAATCACAAAGCCTAA 615 0.426 MVSLSTWFRYFLYKAEYSISLGLRSSKGGQITGETRDVVCKNFFQGKLTYLHWNKGEEMAPTIAGKGATLLVRKLPIADPTSVFVGDVVVVKDPEKPDNYLVRRLAAIEGYEMASTDEKDEPFVLEKDQCWIVAENEKLKAKEANDSRTFGPVHMTDIVGRVIYCLRSAVDHGRIQNSYFSMRKDSPVLEVELDVDEMAKNHKA. 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05623 204 SUPERFAMILY LexA/Signal peptidase 56 175 IPR036286 -
Seca8g05623 204 Gene3D Umud Fragment, subunit A 49 183 - -
Seca8g05623 204 PANTHER OSJNBA0068L06.9 PROTEIN 1 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05623 Seca-Chr8 147844564 147852189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05623 59 173 MADS-box Gene Family AT1G29960 27.642 7.17e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05623 - - gmx:100500100 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05623 8 147844564 147852189 Seca8g05623 8 147844564 147852189 ECH