Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05593 ATGAGCCTCCTAATTAAAGTAGTGACAGCTGTTAGCTGTGTATTGGTTTTGCTAATAGGAGCACTTCCTTTGTCTTCAGATGCACAACTAGATAACTCTTTTTACAGGGACACTTGTCCCACAGTGCATTCAATTGTACGTGAAGTCATTAGAAATGTTTCTAAATCAGATCCCCGTATGCTTGCCAGTCTCGTCAGGCTTCATTTTCATGACTGTTTCGTTCAAGTAGGTTGTGATGCATCAGTCTTGCTGAATGATACCGCTACCATTGTGAGCGAGCAAACAGCTTTGCCAAACAACAACTCATTAAGAGGTTTGGATGTTGTGAATCAGATCAAAACAGCGGTCGAAAATGCTTGTCCTAATACAGTTTCTTGTGCTGATATTCTTGCTCTTGCCGCTCAAATATCCTCTGTTCTGCTATGTTTTTGTTAG 435 0.4092 MSLLIKVVTAVSCVLVLLIGALPLSSDAQLDNSFYRDTCPTVHSIVREVIRNVSKSDPRMLASLVRLHFHDCFVQVGCDASVLLNDTATIVSEQTALPNNNSLRGLDVVNQIKTAVENACPNTVSCADILALAAQISSVLLCFC. 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05593 144 SUPERFAMILY Heme-dependent peroxidases 29 140 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca8g05593 144 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g05593 144 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g05593 144 ProSiteProfiles Plant heme peroxidase family profile. 29 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g05593 144 Pfam Peroxidase 46 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g05593 144 PANTHER PEROXIDASE 72-RELATED 27 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g05593 144 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g05593 144 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g05593 144 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g05593 144 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g05593 144 Gene3D - 30 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05593 Seca-Chr8 147438067 147439124 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05593 15 137 Peroxidase AT5G06720 55.285 5.75e-43 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05593 K00430 - gmx:112997600 229.565