Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05537 ATGGAGAACTTGTTTCGCCTAGTTGATCATGAAGACTTGTTCTCACGTCGTTGCATTTGGGTCAATGGCCCTGTAATTGTAGGGGCAGGTCCATCAGGGCTAGCCACAGCAGCGTGTCTTAGAGAACAAGGGGTACCCTTCATAGTTCTTGAAAGAGCAGATTGCATAGCCTCACTATGGCAAAAACGCACCTATGACAGGTTAAAGCTTCACCTTCCCAAGCAATTTTGCCAACTCCCTAAACTTCCATTCCCACAAGACTTCCCTGAATACCCCACAAAGAAGCAATTCATAGGGTACCTTGAATCCTATGCAAAGCATTTTGAAATCAACCCTCAATTCAATGAGTGTGTTCAATCTGCAAGGTATGATGAAACCAGTGGCTTGTGGAGGGTTAAGACCGTTGCCACAAGTGGCTCAAATCGCACAGAGCTTGAGTACATTTGTAGGTGGCTCGTCGTGGCCACTGGTGAGAATGCAGAGTGTGTGGTGCCTGATATTGAAGGATTGAGTGAATTCAAAGGTGATATCATTCATGCTTGTGATTACAAAACAGGGGAAAATTTCAGGGGAAAGAAGGTTCTAGTTGTTGGTTGTGGTAACTCTGGCATGGAACTCTCACTTGACCTTTGCAACCATAATGCATCACCTTCAATGGTTGTTCGTAGCTCGGTTCATGTGTTGCCTAGAGAAATTTTGGGGAAATCTACGTTTGAATTGGCGGTTTTGATGATGCAATGGTTACCCCTTTGGCTTGTTGATAAGATTCTCTTGATCTTGGCATGGTTTGTGTTGGGTAACATGGAGAAATTTGGGCTCAAAAGGCCATCACAAGGTCCTTTGGCACTGAAGAACACAAAAGGGAAGACCCCTGTTTTGGACATTGGTACTTTGGAGAAAATTAGATCCGGTGACATAAAAGTTGTACCAGGAATTAAGAGGTTCACCAATGGCTGTGTTGAGCTTGTTAATGGTGAAAAACACAATGTTGATGCAGTGGTTCTTGCAACTGGATACCGCAGCAATGTTCCCTCTTGGCTACAGGAAGGTGAATTCTTCTCTAAGAATGGATTCCCAAAGTCACCATTCCCTAATGGTTGGAAAGGAAATGTTGGGCTTTATGCTGTTGGGTTCACAAGGAGAGGGCTCTCTGGCTCTTCATCTGATGCTATGAAAATTGCTCAAGATATTGGCCAAGTCTGGAAACAAGAGACTAAGCAAAAGAAACAACGCACCACTGCTTGTCATAGACGTTGCATTTCTCAGTTTTGA 1272 0.4403 MENLFRLVDHEDLFSRRCIWVNGPVIVGAGPSGLATAACLREQGVPFIVLERADCIASLWQKRTYDRLKLHLPKQFCQLPKLPFPQDFPEYPTKKQFIGYLESYAKHFEINPQFNECVQSARYDETSGLWRVKTVATSGSNRTELEYICRWLVVATGENAECVVPDIEGLSEFKGDIIHACDYKTGENFRGKKVLVVGCGNSGMELSLDLCNHNASPSMVVRSSVHVLPREILGKSTFELAVLMMQWLPLWLVDKILLILAWFVLGNMEKFGLKRPSQGPLALKNTKGKTPVLDIGTLEKIRSGDIKVVPGIKRFTNGCVELVNGEKHNVDAVVLATGYRSNVPSWLQEGEFFSKNGFPKSPFPNGWKGNVGLYAVGFTRRGLSGSSSDAMKIAQDIGQVWKQETKQKKQRTTACHRRCISQF. 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05537 423 FunFam Flavin-containing monooxygenase 24 406 - -
Seca8g05537 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 189 213 - -
Seca8g05537 423 PRINTS Pyridine nucleotide disulphide reductase class-II signature 23 45 - -
Seca8g05537 423 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 25 417 - -
Seca8g05537 423 SUPERFAMILY FAD/NAD(P)-binding domain 25 302 IPR036188 -
Seca8g05537 423 Gene3D - 24 407 IPR036188 -
Seca8g05537 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
Seca8g05537 423 PRINTS FAD-dependent pyridine nucleotide reductase signature 193 211 - -
Seca8g05537 423 Pfam Flavin-binding monooxygenase-like 26 344 IPR020946 GO:0004499|GO:0050660|GO:0050661
Seca8g05537 423 SUPERFAMILY FAD/NAD(P)-binding domain 319 405 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05537 Seca-Chr8 146731934 146734041 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05537 K11816 - gmx:100807325 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05537 8 146731934 146734041 Seca8g05537 8 146731934 146734041 ECH
Seca8g05537 8 146731934 146734041 Seca8g04410 8 126105826 126108292 PCT
Seca8g06317 8 157464569 157473775 Seca8g05537 8 146731934 146734041 PCT