Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05533 ATGGAGAGGAAGAGACATTATTCAGATGTTTCAGCTTCTTTCAAGATCAACAACTCTGTTTTGGCACTAGGATTCTTTTTTGCTTTTGTCCTTCCAACCCTTTTAAGTGCTTCAAGTTCTTTTGCGACTAATAAAGACTCTGGAAATGTGTTCCCTGAATTCATAAAGTGGCACATATACATTGTCAATGGATTGAGCAACAGCCAGAACTTGATCACCCATTGCAAATCCTCTGAAAATGATTTGGGCATCCAAAATCTATCTCCAAGCTCCAATATCACTTGGAGTTTTAAGACAGATTTCTTCCACTCAACGCTATTTTGGTGCTATGTGAGCAAAGACAATGCTTTTGCTTCATTTGAGGTTTTTTGGTATGATGCTCATCTTTTCAACAAGTGTGATTGGAAGAATTGTATTTGGGTTGCTAAAGATGATGGGATTTACCTAAAAGATTTGAGTGAAAAACTTGATGAGTTGTTTTATAGGTGGAATGTTGGAATTTGA 504 0.3671 MERKRHYSDVSASFKINNSVLALGFFFAFVLPTLLSASSSFATNKDSGNVFPEFIKWHIYIVNGLSNSQNLITHCKSSENDLGIQNLSPSSNITWSFKTDFFHSTLFWCYVSKDNAFASFEVFWYDAHLFNKCDWKNCIWVAKDDGIYLKDLSEKLDELFYRWNVGI. 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05533 167 PANTHER - 55 151 IPR010264 -
Seca8g05533 167 Pfam Plant self-incompatibility protein S1 58 163 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05533 Seca-Chr8 146696613 146697116 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05533 59 164 Carbohydrate Esterase AT3G16970 25.234 8.62e-06 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05533 - - mtr:25484172 218.009