Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05526 ATGCTCATAGACCAAGAAATGTCCAAAGAAAAAGACTCCAAATCCAAGCACAACCCACCAAATGTAGTTGCCAAACTAATGGGGCTTGAAACCCTCCCAAAGGATGAGCCTAATTTATCTGTGGTGAGAGGCCATAGAAAAGATTATTCTTCTCAACATATGTATGGCCATTTAGGGTCTCCACTCAAACATTGTCAGGTGGAAGATAGGTTTATGGATAAGGAAATGCTTCATGAAGTTCATCCAAGCACAGAACAGATTGCTTACAAAGATGCATATGAAATATGGATGCCATCTCAGAGAGCAAGCAATGTAATACCAGAGAGAGGAAGGTGGAATGATGATGTTGATGGGGAAAAAATGGCTCTCATTCATCAGAAATTCATGGAAGCAAAACATCTGTCAACAGATGAAAGATTGCGCCAGTCCAAGCAATTTGAAGATGCCTTGGAAGTTTTAAGCTCAAATAATGACCTCTTAGTCAGGTTATTGGATTCACAATATCTTCATGAACTTTACTCCACTCCACCAAATGAGACAAAGCGCATTACTCTTGTTAAACCTTTGAAGATGGTTGACAATGAGAAATCTGCTGGAAAGAGGAAGAAGAATGATAGAATGATTAAGAAAGATGATAAAGCAACTGTATGGGAGAACATGAATCCAGGATACTCTCCAGAAATTCAGAAAGTTGATGAATTTCCAGTTCAATCTACTAGAATAGTGGTCTTGAAGCCTAGCCCTGGGAGAACACATGGGCTTAAGGCTATGGTTTCTCCAACAACTTCATCACCTCGGAATCTTCAAAATGGAGATGATGGTGTACTGGAATCCATAAAATTTGCAAAAGAGATTACACAGCAAATTCATGAAGGCCTGAGGAGCTATCAAAAGGATAAAAATTTATACTCTCCAGTCTTTTCCAATGGCTATTCTGGTGATGAGGGTTTATTTAACAAATCATCATATCATGACTATAAAGCTGGGAATTTCAATGATTTGGAAGCTATGTCATCATTGCCAAGGCTTTCATGGGATTGCATCAATGGCTGGGCCAGTCCTTACTCTACACTATCCTTGGGGCGTGCATCCTGTTCTCCTGAGTCATCAGTGTGCATAGAAGCAAAGAAACGACTTTCTGAAAGATGGAGCATGATGGCATCAAATAGTAAAGCTCCTCAGGAACAAAGGCATGTAAAGAGAAGCTCTACCTTGGGTGACATGCTTTCTCTTTCCCGTATAAAGAAATCTGTAACATCTCAGGAACCAAGCAAATCTGTTTCTTGCCGCCATTCTTTCAATGAGGAAATAAGCATTGGTGATTCTCCTATAAATGTTCCCAGGTCAAATTCTGTCCCTGCATCTTCTACTGTTTATGAAACTGGGCTCAGTGTTGAGGTTTGTGATCATGATGCTGGCAAAGCACATAAGGTGCTGACAAAGTCAAAGAGTATGGGATCATCATTTAGAGGGAAAGTTAAAAGTTTCTTGTTTTCAAGGAATAAGAAATCAACCAAGAAAAAATCTAGCTCATCTCAATCTAAAGATGAATCCCAATCTACTGCCTCTGAAACATCAGATTTTCCAATCCTTAGGGATGATGTGTCTCAAAACTCCAATCTTGGCGGCTTTGAAGAATGTTCTCTTGCAGCTCTATATGAATCATCAGGCAAAACTGCAACAGATTCTGACTCTAATGGACAACATCAAGACATGATTACAATAGAGCCTGGATTGACAGAGTCAAAGGCTATGGTGCCAGAGATTTCAAGTGAAAACCAGGATCAACCTAGTCCAATCTCAGTTTTAGAACCTCCATTTGAAGATTATAATACAGCTCATGAGTCCTTGGACTATATGAAGGATGGTCACCAGGGATCATTGGTGCCTCTGAAGTCCAATTTAATAGACAAATCACCACTTATAGAATCAGTAGCTCGGACACTGTCATGGGATGATTCTTGTGCTCCTTATTCATTAGAACCCCTCAGTGTTTCTTCCTTAGACACCAAGGTAGAGGAACAAGAGTGGCTTCTTTTGGTCCAGAAACTACTATCAGCAGCTGGACTTGATGATCAAGAACAGTATGACTCCTTTCACACTAGATGGTATTCCCTTGAAAGCCCATTGGACCCATCATTGAGGGACACATATGCCAATATAAATGACAAGGACCCTCAGCATCTCCATGAGGCCAAGCGAAGGAAGATGAGATCAAATCAGAAGCTTGTGTTTGACTGTGTCAATGCAGCACTATTGGAATTTGTTGGTTATGGATCAGAGAATTACTTCAATAGCAGCATGTACAGTGGGAGCCACAGCAGGCCCCTAGTCCAAGAGGGTACACCTTCCCCTTTGATGGACCACATTGTGGCCCAAATGAAGGAATTAATAGCAAGTGGGATGAGTAGTGTGTGGGAGGATTGTGGGGACAACCACAGCCTGGTGGTAGAAAGTGTTGTCAGGAAAGAGGTTGTGCAGATTGGGTGGGTTGAGCTAATGAGGTTGGAGATTGATCTTTTGGGAAGGGAAATAGAAGGGAAGTTGATAGAAGAGCTTGTGGAGAATGCTGTGGTTGATTTTACAGGCAGGGCCTGA 2598 0.4134 MLIDQEMSKEKDSKSKHNPPNVVAKLMGLETLPKDEPNLSVVRGHRKDYSSQHMYGHLGSPLKHCQVEDRFMDKEMLHEVHPSTEQIAYKDAYEIWMPSQRASNVIPERGRWNDDVDGEKMALIHQKFMEAKHLSTDERLRQSKQFEDALEVLSSNNDLLVRLLDSQYLHELYSTPPNETKRITLVKPLKMVDNEKSAGKRKKNDRMIKKDDKATVWENMNPGYSPEIQKVDEFPVQSTRIVVLKPSPGRTHGLKAMVSPTTSSPRNLQNGDDGVLESIKFAKEITQQIHEGLRSYQKDKNLYSPVFSNGYSGDEGLFNKSSYHDYKAGNFNDLEAMSSLPRLSWDCINGWASPYSTLSLGRASCSPESSVCIEAKKRLSERWSMMASNSKAPQEQRHVKRSSTLGDMLSLSRIKKSVTSQEPSKSVSCRHSFNEEISIGDSPINVPRSNSVPASSTVYETGLSVEVCDHDAGKAHKVLTKSKSMGSSFRGKVKSFLFSRNKKSTKKKSSSSQSKDESQSTASETSDFPILRDDVSQNSNLGGFEECSLAALYESSGKTATDSDSNGQHQDMITIEPGLTESKAMVPEISSENQDQPSPISVLEPPFEDYNTAHESLDYMKDGHQGSLVPLKSNLIDKSPLIESVARTLSWDDSCAPYSLEPLSVSSLDTKVEEQEWLLLVQKLLSAAGLDDQEQYDSFHTRWYSLESPLDPSLRDTYANINDKDPQHLHEAKRRKMRSNQKLVFDCVNAALLEFVGYGSENYFNSSMYSGSHSRPLVQEGTPSPLMDHIVAQMKELIASGMSSVWEDCGDNHSLVVESVVRKEVVQIGWVELMRLEIDLLGREIEGKLIEELVENAVVDFTGRA. 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05526 865 MobiDBLite consensus disorder prediction 256 271 - -
Seca8g05526 865 MobiDBLite consensus disorder prediction 514 534 - -
Seca8g05526 865 MobiDBLite consensus disorder prediction 1 20 - -
Seca8g05526 865 Pfam Protein of unknown function (DUF3741) 126 165 IPR022212 -
Seca8g05526 865 MobiDBLite consensus disorder prediction 252 272 - -
Seca8g05526 865 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 864 - -
Seca8g05526 865 MobiDBLite consensus disorder prediction 1 18 - -
Seca8g05526 865 Pfam DUF761-associated sequence motif 8 34 IPR032795 -
Seca8g05526 865 MobiDBLite consensus disorder prediction 500 534 - -
Seca8g05526 865 Pfam Domain of unknown function (DUF4378) 681 855 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05526 Seca-Chr8 146667908 146672704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05526 2 862 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 37.717 1.96e-143 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05526 - - gmx:100816611 1097.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05526 8 146667908 146672704 Seca8g05526 8 146667908 146672704 ECH
Seca8g05526 8 146667908 146672704 Seca2g04478 2 130367725 130372474 PCT