Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05511 ATGGCTGACTCCACTCCAACTGCAACTCCTTCTAAAGACACTTTCGCCGCCGCCGAATCATCTTCTTTCCAACGAACGGTTTCCTTACATGACTGGTGGCTGATTAGAGCCCAAAACGACTTCCAAGGAAAGCGTTTAGCCGTCGCAGGCTCATCCAGAAAGGAAGGAGCTAGGCGGTTGTTTGTTTCCGCTCCTGTAGTCAAAAGATATGATGTGTTTTCGCTGGAGACTGCGGATGGAATATACGTTAACATCAATGGTTTCATTAACGAGCAGCGCACACTCGAAAATGGTTTCGCCCCTGAGGTTTTCAATCATTTTTTGTTTGGCTTTCCTCCAAACTGGGAAAGATATGCTCTAGATTGCTTCAGTAAAAAATCAACAGCTGGCACTGAACCAGAGACTTCTTTTCCTGATAATGCCACACCAGATCATCCAGAAATATTGTCTGATGGTAAATATGTGGGTGTTTCTTGCACAGAAAAATTTATTCCTACTTCACTGGCATCATCGGAAGAGGTCCCGGGAGATAGTGAGAAGCCATTCCCTGAAGTTGAATGCAATTTGTCGAAAGGAATGAGTGAGGTTAATGTTGTTAATGGTAGTGGCAGGAGTAGACATAGTGCTCGGTTGCATAATATTAAAGTCTACCAACAGCAGAAGCAGCCTGCCAACACAGAAAAATCTATTCCGACTTCACTGGCATCATCCGAAGAGGAAGAGGCTCCGGGAAATAGTGAGAAGCCATTCCATGAAGTTGAATGCAATTCGTCGAAAGGGATGAGTGAGGTTAATGTTGTTCATGGTAGTGGCAGGAGTAGACGTAGTGCTTGGTTGCATAATATTAAAGTCTACCAACAACAAAATCAGCCTGCCAACACAGAAATATCTGTTCCTACATCACTGGCATCATCCGAAGAGGAAGAGGCCCCGGGAGATAGTGAGAAGCCATTCCCTGAAGTTGAATGCAATTTTTCGAAAGGAATGAGTGAGGTTAATGTTGTTTATGGTAGTGGCAGGAGTAGACGTAGTGCTCGGTTACATAATAGTAAAGTCTACCAACAGCAGAAGCAGCCTGCCAACACAGAAAAATCTATTCCTACGTCACTGGCATCATCGGAAGAGGAAGAGGCGCCGGGAGATAGTGAGAAGCCATTCCATGAAGTTGAATGCAATTTGTCGAAAGGGATGAGTGAGGTTAATGTTGTTCATGGTAGTGGCAGGAGTAGACGTAGTGCTCGGTTGCATAATATTAAAGTCTACCAACAGCAGAAGCAGCCTGCCAACGCAGAAAAATCTATTCCTACTTCACTGGCATCATCGGAAGAGGAAGAGGCGCCGGGAGATAGTGAGAAGCCATTCCATGAAGTTGAATGCAATCTGTCGAAAGGGATGAGTGAGGTTAATGTTGTTCATGGTAGTGGCAGGAGTAGATATAGTGCTCGGTTGCATAATATTAAAGTCTGCCAACAGCAGAAGCAGCCTGCCAACGCAGAAAAATCTATTCCTACTTCCCTGACATCATCAGAAGAGGCCTCGGGAGATAGTGAGAAGCCATTCCATGAAGTTGAATGCAATTTGTCGAAAGGGATGAATGAGGTTAATGTTTTTCATGGTAGTGACAGGAGTAGACGTAGTGCTCAGTTGCATAATATTAAAGTCTGCCCACAGCAGAAGCAGCCTGCTTCTAGAGCTCCTCTGAAGCATCTGGATGAAGAGCAGAGCTCTACCTCAGCAGCGACAGAAAATTGTGATGGAGAGGGAATGAGAAGCTATGATCTAGGTTGCTACAGAGAAGAATCAACAGCTGCAATTGATTCAGGCATGGAAAAATCCATTCCTACTTCTTTGGTATCACCAGAAGAGACCCCAGAAGATTGCGAGAAGCCATTCTCTGAAGATGAATGCGATGTTTCAAAGGAGAAGGGTGTTGTTAATGTTGCATATGGTAGTGGTGGGAATAGACGCAAGGCCAGGGCCAGGTTGCCTAATATTGAAGTCTGCCAGCGGAAGAAGCAGTCTGCTTCTGCTTCTGGAGGTCCTCTGAAGCATCCAGATAAAGAGCAGAGCTCTACTTCAGAGGCATTGGAAAATCATGATGGAGAGGGACTGAAAAGTCCAGTGACACCCATTCAGTCACAGTCAAAAGGACTAGTAAACATATCATCTGAGCAGCTCGTTAAAAAATCTGCATCCAGAATTTCTAGAAGTTTTTCAACAAAAACTAAGGGCTGTTATAAGAAAAAGACAGTGACAGTTAAAACAAAATCAGTTGGGCCTAAGAGAAAAATGACTAAATCTGCATCTGCTGTGAAATCTTCACGAGAAAGAGATTTAAGCCACTTGAACAAGGGAAGCAAACAAAAAATATCCTCAGTCTCTCCAGAGTCATTGAGTTTCAAAAAATCCAGATCTGGTAGGTTGCTCCTACCTCCCTTAGAGTTTTGGCGCAATCAAATACCAGTTTATAATGCGGACCATGAGCTTACAGAAATTCATGAAGGCACATCTTTGGTATCACCTTGTAGTGGTTCTTCACCATCATTGAGCCGCTCAATCTCAGAGAAAGCAAATGCAGTAGAGAACTAA 2589 0.4399 MADSTPTATPSKDTFAAAESSSFQRTVSLHDWWLIRAQNDFQGKRLAVAGSSRKEGARRLFVSAPVVKRYDVFSLETADGIYVNINGFINEQRTLENGFAPEVFNHFLFGFPPNWERYALDCFSKKSTAGTEPETSFPDNATPDHPEILSDGKYVGVSCTEKFIPTSLASSEEVPGDSEKPFPEVECNLSKGMSEVNVVNGSGRSRHSARLHNIKVYQQQKQPANTEKSIPTSLASSEEEEAPGNSEKPFHEVECNSSKGMSEVNVVHGSGRSRRSAWLHNIKVYQQQNQPANTEISVPTSLASSEEEEAPGDSEKPFPEVECNFSKGMSEVNVVYGSGRSRRSARLHNSKVYQQQKQPANTEKSIPTSLASSEEEEAPGDSEKPFHEVECNLSKGMSEVNVVHGSGRSRRSARLHNIKVYQQQKQPANAEKSIPTSLASSEEEEAPGDSEKPFHEVECNLSKGMSEVNVVHGSGRSRYSARLHNIKVCQQQKQPANAEKSIPTSLTSSEEASGDSEKPFHEVECNLSKGMNEVNVFHGSDRSRRSAQLHNIKVCPQQKQPASRAPLKHLDEEQSSTSAATENCDGEGMRSYDLGCYREESTAAIDSGMEKSIPTSLVSPEETPEDCEKPFSEDECDVSKEKGVVNVAYGSGGNRRKARARLPNIEVCQRKKQSASASGGPLKHPDKEQSSTSEALENHDGEGLKSPVTPIQSQSKGLVNISSEQLVKKSASRISRSFSTKTKGCYKKKTVTVKTKSVGPKRKMTKSASAVKSSRERDLSHLNKGSKQKISSVSPESLSFKKSRSGRLLLPPLEFWRNQIPVYNADHELTEIHEGTSLVSPCSGSSPSLSRSISEKANAVEN. 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05511 862 MobiDBLite consensus disorder prediction 420 454 - -
Seca8g05511 862 MobiDBLite consensus disorder prediction 490 520 - -
Seca8g05511 862 MobiDBLite consensus disorder prediction 348 372 - -
Seca8g05511 862 MobiDBLite consensus disorder prediction 707 734 - -
Seca8g05511 862 MobiDBLite consensus disorder prediction 490 513 - -
Seca8g05511 862 MobiDBLite consensus disorder prediction 555 586 - -
Seca8g05511 862 MobiDBLite consensus disorder prediction 769 784 - -
Seca8g05511 862 MobiDBLite consensus disorder prediction 687 701 - -
Seca8g05511 862 Pfam SANTA (SANT Associated) 27 118 IPR015216 -
Seca8g05511 862 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 7 835 - -
Seca8g05511 862 MobiDBLite consensus disorder prediction 609 635 - -
Seca8g05511 862 MobiDBLite consensus disorder prediction 216 255 - -
Seca8g05511 862 MobiDBLite consensus disorder prediction 753 797 - -
Seca8g05511 862 MobiDBLite consensus disorder prediction 289 321 - -
Seca8g05511 862 MobiDBLite consensus disorder prediction 649 734 - -
Seca8g05511 862 MobiDBLite consensus disorder prediction 836 862 - -
Seca8g05511 862 MobiDBLite consensus disorder prediction 289 304 - -
Seca8g05511 862 MobiDBLite consensus disorder prediction 216 240 - -
Seca8g05511 862 MobiDBLite consensus disorder prediction 420 440 - -
Seca8g05511 862 MobiDBLite consensus disorder prediction 341 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05511 Seca-Chr8 146382690 146388021 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca8g05511 SANTA 2.3e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05511 - - cam:101500947 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05511 8 146382690 146388021 Seca8g05511 8 146382690 146388021 ECH