Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05504 ATGCCATTGAACATAACCTCCATCAAAACATCTTCCAATGGAGCTTGGCAAGGAGATAACCCATTGAACTTTGCCTTCCCGCTCCTAATAGTTCAAATCACCTTAATCATCATTGTGACACGCTTCCTCGCTTTCCTCTTCAAACCTCTGCGTCAACCCAAAGTCATTGCTGAGATTGTCGGTGGAGTTGTGTTAGGTCCATCAATTCTAGGAAGGAACAAATCTTACATGCACCGTGTGTTCCCATCATGGAGCACTCCCACGCTTGAATCCGTTGCTAACATTGGCCTTCTTTACTTCTTATTCCTCGTCGGTCTTGAACTCGATTTGAATTCCATTCGCCGCAGTGGCAAAAGAGCTCTCAGTATAGCAGCCGCCGGAATTTCCCTTCCCTTCGCCTGCGGCATCGGCACCGCCTTGATACTCCGAAAAACCGTCGCCGGTGCCGCCGATGTTGGATTCGCTCAGTTTGTCGTCTTCATGGGCGTGGCGCTTTCCATAACCGCTTTCGCTGTACTCGCCCGTATCCTAGCAGAGCTAAAACTCCTCACCACTCGTGTCGGCAGCACTGCCATGGCCGCCGCCGCGTTCAACGACGTCGTCGCGTGGATCCTCCTCGCCCTCGCCATTGCACTCGCTGGCGACGGCAACAACAGCCACAAGAGCCCACTGGTGTCCGTTTGGGTCCTCCTCTCCGGCGTCGCGTTCGTGATCTTCATGATGACAGCGGTCTCGCCGGCGATGGAATGGATCGGCGGAAGGTGCTCGGCGGTGCACGGCACCGTTGACGAAGGTTATATCTGCTTGACCTTAACGGGGGTGATGGTGTCCGGGTTTGTGACGGATCTAATTGGGATCCATTCGGTGTTTGGGGCGTTCGTGTTTGGGCTAACGATTCCGAAAGGGGCTTTTGCGGAGAGTATGATGGAGAGGATAGAGGACTTTGTGTTGGGGATTTTGCTACCGTTGTACTTTGCTTCGAGTGGGTTGAAAACGGACGTGACTAAGATAAATGGGGCGGAAGGGTGGGGGCTTCTGGCTTTGGTCATAACGACGGCATGCGCGGGGAAGATAGTGGGGACCTTTGTGGTGGCGTTGATGTGCAGGATTCCAGTGAGGGAGTCGTTGACGCTTGCTGTCCTCATGAATACCAAAGGTCTTGTGGAGCTCATCGTCCTCAATATTGGGAAGGAGAAAAAGGTTTTGAATGATGAAATGTTTGCAATTTTGGTGCTCATGGCTCTATTTACCACCTTTATCACAACACCTATAGTGATGTTTATTTACAAACGCAGTCATGACGAATCTTCTCGGACGCTTTGCAAACTAGGGGACCTCAGCTCCAACGGCAAAGCCTCTAACGACCTTCGAGTCTTAGCTTGCATTCACGGCCCCACCAATGTTCCTTCCTTCATTAACCTCATCGAGACAACAAGGAGCAACAAGAAGTCCTCTATTAAGCTATTTGTCATGCACCTCATGGAGCTAACAGAGCGTTCTTCCTCCATCACCATGGCTCAACGTGCTCGCAAGAATGGAATCCTTTTCTTTAACCGTTCCCGACACAATGAGTGGCTAAACCAATTAGCTACGGCCTTCCAAGGCTACAGTCATCTAGGTCAAGTTTCAGTTCAATCCACAACTGCTATATCTTCATTGTCCACCATGCATGAGGATGTATGCCACGTGGCTAATGACAAAAGAGTGGCCATGATTATCTTACCCTTCCACAAACAATGGAGGAAGATGGAAATCGAAGGGGAGGAGATGGAGAACAATGGCGTCTCGAAGCACCAAATGATAATGGAAAGTACTGGTCATAGAGGTGTGAACCAGAGGGTGCTTAAAGAGGCACCTTGCTCTGTGGCTATGTTTGTTGACAGAGGATTTGGCAATAAGCCTCAATCTGAGATTGTGACCAAACAAGTTTGTGTTATGTTCTTTGGTGGCCCTGATGACCGTGAAGCCTTACAGTTAGGGGATAGAATGTGTGATCACCCTACAATTAAAATAACTGTTATGAGGTTCATTATTGATCAAAAAGATGTATTGGAAGGTAACCATATTGTGTCACAACAGTTATCTACTACTAAATTGAACCATCAAAATGAAAAGGAGTTGGATGACAAGGCAATAACACAGTTCCAGAACAAGTGGGGTGGAATGGTGAAATGTATTGAGAAGGTAAGTGACAACATTGTAGAAGAGGTGTTATGTGTGGGGCGAAGTGGAGAATATGATCTCACAATTGTTGGGAAAGGGCGGTTTCCATCAAGTATGGTAGCGGGGAGACAAGTAGAGCACGAGGAATTAGGCCCAATTGGAGATATTCTAACATCAACACATGAGGTGATTTCTTCAGTACTAGTAATTCAACAATATCATGTGCATGAAATTGGACAGGGAGGCCCAATTGTGTAG 2421 0.4808 MPLNITSIKTSSNGAWQGDNPLNFAFPLLIVQITLIIIVTRFLAFLFKPLRQPKVIAEIVGGVVLGPSILGRNKSYMHRVFPSWSTPTLESVANIGLLYFLFLVGLELDLNSIRRSGKRALSIAAAGISLPFACGIGTALILRKTVAGAADVGFAQFVVFMGVALSITAFAVLARILAELKLLTTRVGSTAMAAAAFNDVVAWILLALAIALAGDGNNSHKSPLVSVWVLLSGVAFVIFMMTAVSPAMEWIGGRCSAVHGTVDEGYICLTLTGVMVSGFVTDLIGIHSVFGAFVFGLTIPKGAFAESMMERIEDFVLGILLPLYFASSGLKTDVTKINGAEGWGLLALVITTACAGKIVGTFVVALMCRIPVRESLTLAVLMNTKGLVELIVLNIGKEKKVLNDEMFAILVLMALFTTFITTPIVMFIYKRSHDESSRTLCKLGDLSSNGKASNDLRVLACIHGPTNVPSFINLIETTRSNKKSSIKLFVMHLMELTERSSSITMAQRARKNGILFFNRSRHNEWLNQLATAFQGYSHLGQVSVQSTTAISSLSTMHEDVCHVANDKRVAMIILPFHKQWRKMEIEGEEMENNGVSKHQMIMESTGHRGVNQRVLKEAPCSVAMFVDRGFGNKPQSEIVTKQVCVMFFGGPDDREALQLGDRMCDHPTIKITVMRFIIDQKDVLEGNHIVSQQLSTTKLNHQNEKELDDKAITQFQNKWGGMVKCIEKVSDNIVEEVLCVGRSGEYDLTIVGKGRFPSSMVAGRQVEHEELGPIGDILTSTHEVISSVLVIQQYHVHEIGQGGPIV. 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05504 806 Pfam Sodium/hydrogen exchanger family 35 425 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca8g05504 806 Gene3D - 28 438 IPR038770 -
Seca8g05504 806 PANTHER CATION/H + ANTIPORTER 9 795 - -
Seca8g05504 806 FunFam Cation/H(+) antiporter 15 28 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05504 Seca-Chr8 146317381 146327848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05504 75 799 Antiporter Super Family AT3G53720 59.313 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05504 K26731 - cave:132191360 1056.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05504 8 146317381 146327848 Seca8g05504 8 146317381 146327848 ECH