Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05479 ATGAGTGGAGCGAAGGGGAAGAAGAAGGGAGTGAGCTTCGTGATCGATTGCGCGAAGCCAGTGGAGGATAAGATTATGGATATTGCTTCTCTTGAGAAGTTCCTTCAGGAGAGAATCAAAGTTGGCGGCAAGGTCGGTGCCCTCGGTGATTCCATTACCGTTACTCGGGAAAAGACCAAGATCACCGTCACCTCCGACAGCAACTTCTCCAAACGGTATCTGAAATACTTAACCAAGAAGTACCTGAAAAAGCACAATGTGAGGGATTGGCTTCGGGTGATTGCCTCCAACAAGGACCGGAATGTCTATGAGTTGAGATACTTCAACATTGCTGAGAATGAGGGTGAAGAGGAAGACTAA 360 0.475 MSGAKGKKKGVSFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKVGALGDSITVTREKTKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED. 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05479 119 Gene3D - 1 119 IPR038526 -
Seca8g05479 119 PANTHER 60S RIBOSOMAL PROTEIN L22 3 119 IPR002671 GO:0003735|GO:0005840|GO:0006412
Seca8g05479 119 FunFam 60S ribosomal protein L22-2 1 119 - -
Seca8g05479 119 Pfam Ribosomal L22e protein family 9 117 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05479 Seca-Chr8 146027888 146030727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05479 4 119 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 88.793 8.47e-65 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05479 K02891 - gmx:100500073 218.779