Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05476 ATGGACAAATCCCGCAACACCAAGTCCAACGTTGCAGCTCCCAACCAATCCCAACCAGCTCTTCATCAAGGAAACAAGAAGGCTCATAGACAGCGACAACCTCCAGATTTGTCTCCTGATTCTAGTTCTTGCGGTGGTGGGGTTGCAGACAAAGATTCGTTCTCATTTAAATTTGGGTGGAGATCTTCTAAACAACCTTTTGGAACTCCAATTAAGAAGTTGTTAACTGAAGAGATGTCATCAAACACTGAATCTAAAAGAAGATCACCAGGTGTTATTGCCAGATTGATGGGTCTTGATGGGCTGCCATTTCAGCAGCCTGCTAATAAGCAGCACAAGGGTTTGTCAGAAAACCATCTACAGGGGACAACACAATTAGAGAAAACTCGAAACAGAGGAACAACGAATGATGGCCGATCCTCTAGGAAGAGCTCCAAGGATCAGCAAGAATTTAAGGATGTATTTGAGGTCTCTGAGATCCCAAAGGTAGAGAGTAATAGGTATTCATCGCATGGGTGTGCAGACTTGAAGATCACCGATGCTGAGATTTCATTCATTGAACAGAAGTTCATGGATGCCAAACGCCTTGCAACTTATCAGGATTTACAGTCTTCAAAGGATTTCCGTGATACACTTGAGGTTTTGGACTCTAACAAGGATCTTCTGCTAAAATACTTTAAGCGACCAGATTCTTTGTTTAAAAAGCATTTGAGTGATCTGCAAGCTTCTCCTCTCCAATCACATTTTGGTAATGTTGAAGCTACAAATATTGAGAAGTATGAACATGACTACAGTTGGAGGCCTGATAGGGAGACAACACGGTCGAATTACAATAGATTTTCTCAGAAACAACAAGATGGTTATCCTTGCCAATTTGACAAAATACATGTGATGCATAGTTCACCAAAATCATCAAAGCTTCAGTTTAAGGGTAGCCATGAACAAGATGCAGTCCCCACAAAGATTGTTGTCCTAAAACCTAATCTTGGAAAATTGCAGAATGGTACGAGGATTGCATCATCACCTTGTTCTTCGCATAATTTTCTGTCAGAGCATGGAAATCACACTGAACTTTCGAATGCCAGATTTAGAGACACTGAACTGTATCAAATGACAAATTTGCCTGACAGTGCCAGGTCTTTTAGGCACAATTCATTGGAATCTAGAGAAATTGCAAAGGAAATCACTAGGCAAATGAAAAATAGTCTGAGCAATGGTTGCACAATGTTTTCGTCTTCTAGATTTAGAGGATATACTGGGGATGGTAGTTCATATAGTGTTTCTGGGAATGAATCTCCAGAGGAAACAACATCAACTTTGGGAAACTCATTGGACTTAAATAACCGTAGCAGGCGGTCATCCCATTCTAGTGAATCATCTGTGAGTACAGAGGCAAAAAAGAGATTATCAGAGAGGTGGAAAATGGCACACAAGTCTCAAGAGGTGCAAGTCATCAGCAGGAGCAGCACGCTGGCTGAAATGCTTGCCATCCCTGATAACGAAATGAAGGCTGCAAATTTTGACAGCATGGCTAGTGGGGAAGGTTTAGATGATAAATTTGCTCGCAATGGTGAACCTTCTGGGTGGGCAGAACCATTGGGGATCAGCAGTAGGGATGGTTGGAAGGATGGATATATTGGAAGTTTGCCCAGGTCAAAATCTCTTCCCAGTTCATCTATTGCCTTTGGAAGTCCTAGAACATTCTTGCACACTGAAGCACTTCGTGATGATAGATTCATGGTGCGAAAGGAAGCCCTTAAACGGGAGCGGAAAAGAGATACAAAGAATCTTGATCATAGACATAGCGTGAATACTAGAAACACAAAATCTGGTCACAAGAAGTCTCGGTCTTTGCATTCATCGAAGCTGGAAGGTAGTGAGTTTTCTCCAGACTTAAATACAATTCAGAATATAATGAAGATCAAACTTGAAGATTCACCCAAGCTAAAGGTTCTGGCCACTGGACCCTTTGCCGAGACCCTCAAAGATAAAATTGCAGTTAATGATGATGCTATGGATGTGGCAAATGAAAACACAAATGGGTCTGCTGAACCTTCTTCTGATAAGGTGCTTTGTGAATTATCTTCTCGTGTCATGATAAAAGGTGACAGTGGTGTTGTTGACAAAGACAATTCAACACAGCAGGACCTATCGGCTGAGTCTTCTGGTGGAAGTTCAGTCTTCTCTGAACCACCTGTACCTAGACTTGAATCTTCATGCTGTAAAGATGGTGATCAACCCAGTCCAGTCTCAGTCCTTGAACCTTCATATACTGATGATCTGTCATCTTGTTCTGAATGTTTTGAAAGTCTCAGTGCTGACCTACAAGGGCTGCGAATGCAACTCCAGTTGCTGAAGTTGGGATCTGAAGGAGATGTGGAAGGATCCATGCTAATTTCAAGCGATGAAGATGGTGGGGAAGTATCTACTGGAGTGTTAGAAGAAAATGGATTATGCAGAAATGAAGATAGCTGGGAGTCTTCATACATTATTGATGTCTTGTCTGAGTCTGGCATCAATGGGGCTGGTCTCGATACAATTATGGAAGCTTGGCATTCTCTAGAATGCCCTGTGAGTCTTTCAGTGTTTGATGAACTTGAAAAGAGGTACTGTGATTGGACTACTTGTTCAAGGTCTGAAAGGAGATTGCTTTTTGACCGTATAAATTCAGGAATTGTCAAGATGCACCAGCAATCCACATATGCACAACCATGGGTGGCCTCTGCAACAAAAAAATTTGGTTCTATCTTGACCCAGAATGGGCTTCAAGATGATCTTTATAGGATGCTAGGGAGCCAAGGAAAAGTAGAGGATGATGCTCTGGGGATGGTCCTGGTTGGGGAGTCGCAGTGGTTGGACTTGAAAGATGACATTGATGTAATAGGCAGAGAAGTCGAGAGATTGTTATTAGATGATATAGTGGCAGAGATAGCAGGTGCCTAG 2943 0.4217 MDKSRNTKSNVAAPNQSQPALHQGNKKAHRQRQPPDLSPDSSSCGGGVADKDSFSFKFGWRSSKQPFGTPIKKLLTEEMSSNTESKRRSPGVIARLMGLDGLPFQQPANKQHKGLSENHLQGTTQLEKTRNRGTTNDGRSSRKSSKDQQEFKDVFEVSEIPKVESNRYSSHGCADLKITDAEISFIEQKFMDAKRLATYQDLQSSKDFRDTLEVLDSNKDLLLKYFKRPDSLFKKHLSDLQASPLQSHFGNVEATNIEKYEHDYSWRPDRETTRSNYNRFSQKQQDGYPCQFDKIHVMHSSPKSSKLQFKGSHEQDAVPTKIVVLKPNLGKLQNGTRIASSPCSSHNFLSEHGNHTELSNARFRDTELYQMTNLPDSARSFRHNSLESREIAKEITRQMKNSLSNGCTMFSSSRFRGYTGDGSSYSVSGNESPEETTSTLGNSLDLNNRSRRSSHSSESSVSTEAKKRLSERWKMAHKSQEVQVISRSSTLAEMLAIPDNEMKAANFDSMASGEGLDDKFARNGEPSGWAEPLGISSRDGWKDGYIGSLPRSKSLPSSSIAFGSPRTFLHTEALRDDRFMVRKEALKRERKRDTKNLDHRHSVNTRNTKSGHKKSRSLHSSKLEGSEFSPDLNTIQNIMKIKLEDSPKLKVLATGPFAETLKDKIAVNDDAMDVANENTNGSAEPSSDKVLCELSSRVMIKGDSGVVDKDNSTQQDLSAESSGGSSVFSEPPVPRLESSCCKDGDQPSPVSVLEPSYTDDLSSCSECFESLSADLQGLRMQLQLLKLGSEGDVEGSMLISSDEDGGEVSTGVLEENGLCRNEDSWESSYIIDVLSESGINGAGLDTIMEAWHSLECPVSLSVFDELEKRYCDWTTCSRSERRLLFDRINSGIVKMHQQSTYAQPWVASATKKFGSILTQNGLQDDLYRMLGSQGKVEDDALGMVLVGESQWLDLKDDIDVIGREVERLLLDDIVAEIAGA. 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05476 980 MobiDBLite consensus disorder prediction 587 605 - -
Seca8g05476 980 MobiDBLite consensus disorder prediction 703 750 - -
Seca8g05476 980 Pfam DUF761-associated sequence motif 84 103 IPR032795 -
Seca8g05476 980 MobiDBLite consensus disorder prediction 421 460 - -
Seca8g05476 980 MobiDBLite consensus disorder prediction 7 24 - -
Seca8g05476 980 PANTHER AFADIN 27 978 - -
Seca8g05476 980 MobiDBLite consensus disorder prediction 132 151 - -
Seca8g05476 980 Pfam Domain of unknown function (DUF4378) 827 976 IPR025486 -
Seca8g05476 980 MobiDBLite consensus disorder prediction 421 474 - -
Seca8g05476 980 MobiDBLite consensus disorder prediction 707 728 - -
Seca8g05476 980 MobiDBLite consensus disorder prediction 587 629 - -
Seca8g05476 980 MobiDBLite consensus disorder prediction 1 151 - -
Seca8g05476 980 Pfam Protein of unknown function (DUF3741) 187 231 IPR022212 -
Seca8g05476 980 MobiDBLite consensus disorder prediction 109 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05476 Seca-Chr8 145982024 145988099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05476 66 980 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 38.758 8.94e-149 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05476 - - ccaj:109788117 1340.1