Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05448 ATGCTGACGGTGGCGATCCACAGCGGGGCAAGGTGTACCTGCAGGGACTCCGACGCTCAACGTAAGATATCAGTTCAACAGAGTGACGAGATTGAAGAGATATTTTCTGCTCATTATGGAGTCTACGTGAAATATGATATTGGAGTGCTAGCTGATAAATCTCTCATAAAGATTAATATTGATTGGGCAAATCGTGTGACAATGCATGACTTGATAGAGGAAATGGGAAAAGAAATTGTTCAACAAGAATCACCAAAAGATCCTGTAAAACGTAGTAGGTTATGGTTTCATAAAGATATAATTCAAGTTTTAGAAGAAAATACGATTGAAGAGATATTTTCTGCTCATTATGAAGTCTACGTGAAATATGATATTGGAGTGCTAGCTGATAAATCTCTCATAAAGATTAATATTGATTGGGCAGATCGTGTGACAATGCATGACATGATAGAGGAAATGGGAAAAGAAATTGTTCAACAAGAATCACCAAAAGATCCTGTAAAACGTAGTAGGTTATGGTTTCATAAAGATATAATTCAAGTTTTAGAAGAAAATACTGCTTATCACACCTCAAGTCACACAAATGTCAAGCCTTTTCTTACTGCAGAACCTTTTGCAGAAAATTCAGCTGAAACAGAATACTGTAGAGTACCTTCTGCAGGATCTGTAACTTCTTCAGATCAATATGAATCTACAAACCTCTCAAGAATACTCACTCTTTTACTGTCACAAGAGACACACTCAATCTCTAGTCTCCTTGTGACTTTACAAGATGAAATAGAAGAACAAGATGAGTATAAGGCTCAAAATAAATACATATACAGCACAACAGAAGCTAAGTATTGA 846 0.3605 MLTVAIHSGARCTCRDSDAQRKISVQQSDEIEEIFSAHYGVYVKYDIGVLADKSLIKINIDWANRVTMHDLIEEMGKEIVQQESPKDPVKRSRLWFHKDIIQVLEENTIEEIFSAHYEVYVKYDIGVLADKSLIKINIDWADRVTMHDMIEEMGKEIVQQESPKDPVKRSRLWFHKDIIQVLEENTAYHTSSHTNVKPFLTAEPFAENSAETEYCRVPSAGSVTSSDQYESTNLSRILTLLLSQETHSISSLLVTLQDEIEEQDEYKAQNKYIYSTTEAKY. 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05448 281 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 37 105 IPR044974 GO:0006952
Seca8g05448 281 SUPERFAMILY "Winged helix" DNA-binding domain 26 105 IPR036390 -
Seca8g05448 281 SUPERFAMILY "Winged helix" DNA-binding domain 107 183 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05448 Seca-Chr8 145506865 145515681 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05448 40 106 WRKY Transcription Factor Family AT5G45050 38.806 2.41e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05448 - - cave:132162772 126.331