Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05440 ATGGCAACTGTAGCCGCAGTTCGTCCTCCCCCGTTAACTTCCACTTCCGACCCACCTCCTCTCTTTGATGGAACTACCAGGTTGTTCATCAATTACGCTTGCCCTTATGCACAACGTGTATGGATCACAAGGAACTACAAGGGGCTACAAGACAAGATCCAATTGGTTCCTATCGACCTTCAAAACAGGCCTGCTTGGTATAAGGAGAAACTCTACCCTGAAAATAAGGTGCCATCCTTGGAGCACAATGGCAAGGTATTGGGAGAAAGTCTTGATCTGATCAAATATGTAGATGCCAACATCGAAGGGACACCTCTGCTTCCAAGTGATCCTGCCAAGAAAGAGTTCGGTGAGCAACTGTTATCCCATGTTGATACATTCACCAGAGACCTGTTTGTTTCATTGAAAGGGGATGCTGTACAACAAGCCAGTCCTGCTTTTGAATACTTGGAGAATGCTCTTGGTAAATTTGATGATGGGCCATTCCTGCTTGGTCAATTCAGTTTGGTGGATATTGCTTATATTCCGTTTGTTGAAAGATTCCATATTGTATTTGCTGAGGTGTTCAAGCATGACATCACTGAAGGAAGGCCTAAACTTAAAGCATGGATTGAGGAGTTGAACAAGATTGGTGCTTATACAGAGACAAGAGTCGATCCTCAGGAAATAGTTGATCTTTTCAAGAAACGTTTTCTGCCTCAACAGTAA 708 0.4364 MATVAAVRPPPLTSTSDPPPLFDGTTRLFINYACPYAQRVWITRNYKGLQDKIQLVPIDLQNRPAWYKEKLYPENKVPSLEHNGKVLGESLDLIKYVDANIEGTPLLPSDPAKKEFGEQLLSHVDTFTRDLFVSLKGDAVQQASPAFEYLENALGKFDDGPFLLGQFSLVDIAYIPFVERFHIVFAEVFKHDITEGRPKLKAWIEELNKIGAYTETRVDPQEIVDLFKKRFLPQQ. 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05440 235 Pfam Glutathione S-transferase, N-terminal domain 28 103 IPR004045 -
Seca8g05440 235 CDD GST_C_Lambda 110 228 - -
Seca8g05440 235 Gene3D - 103 234 - -
Seca8g05440 235 SUPERFAMILY Thioredoxin-like 18 105 IPR036249 -
Seca8g05440 235 SFLD Main (cytGST) 27 208 - -
Seca8g05440 235 PANTHER GLUTATHIONE S-TRANSFERASE L1 3 231 IPR044629 GO:0004364
Seca8g05440 235 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 24 105 IPR004045 -
Seca8g05440 235 SUPERFAMILY GST C-terminal domain-like 102 231 IPR036282 -
Seca8g05440 235 Pfam Glutathione S-transferase, C-terminal domain 139 205 - -
Seca8g05440 235 FunFam Glutathione S-transferase L2, chloroplastic 1 102 - -
Seca8g05440 235 SFLD Glutathione Transferase (cytosolic) 27 208 IPR040079 -
Seca8g05440 235 Gene3D Glutaredoxin 1 102 - -
Seca8g05440 235 FunFam Lambda class glutathione S-transferase 103 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05440 Seca-Chr8 145423732 145425879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05440 8 232 Glutathione S-transferase Gene Family AT5G02790 67.556 8.83e-118 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05440 K00799 - gmx:547597 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05440 8 145423732 145425879 Seca2g04567 2 131787038 131789871 PCT