Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05421 ATGGAGACTATGCTACCCTTCTTCTTGTCCTCTCTCTCACTCTTGCTGTTACTCCTCTTGCCTCTTTCCTCTTCTCAGATGCCAGGTTTTGTAAGTTTGGACTGTGGAGGTAAAGAAAATTTCACTGACGAAATTGGTCTTAAATGGACTCCTGATGATAAGATTACTTATGGAGAAATAAGCACTATTTTGGTTGCCAACGAGACACGGAAGCAATACACCACACTACGACATTTTCCTGCTGATTCCAGAAAATATTGCTACACACTTAATGTTGTCAGTAGGACAAGGTACCTACTGAGGGCAACATTTTTGTATGGGAACTTTGATAGCAACAATGTTTATCCAAAATTTGACATATCTGTTGGGGCGACTCATTGGTCTACTATTGTCATATCTGATGCTAACACTATAGAAGTGAGAGAGCTTATATTTTTAGCTTCAAGTCCTACAGTTAGTGTATGTTTATCAAATGCAACAACTGGGAAGCCATTCATATCTACGCTTGAACTCCGGCAATTCAATGGTTCGGTTTATTATACATACTATGAGGAACAATTTTACCTCAGTGTCTCTGCAAGGATAAATTTTGGTGCAGAGAGTGATGCCCCAATCAGGTATCCTGATGATCCATTTGATAGAATTTGGGAATCAGATTCTGTTAAGAAAGCAAATTATCTCGTTGATGTTGCTGCTGGAACTAAGAAAATTTCTACCAAAGTACCAATTGATGTTAACAGAGATGAAATGCCACCTGTGAAAGTAATGCAGACAGCGGTAGTGGGTACAAATGGATCTCTAACTTACCGGTTGAACTTGGATGGTTTTCCTGGTATTGGATGGGCATTCAGCTATCTTGCAGAGATTGAAGATTTGGCTCAAAATGAAACTAGAAAATTCAGGCTTGTACTTCCGGGCCAGCCTGATGTTAGTAAGGCTGTGGTAAATATTGAAGAAAATGCCCCAGGAAAATATCGACTTTATGAACCAGGATTCAACAATTTATCCCTACCCTTTGTGCTGTCCTTTAGATTTGGCAAAACATCTGATTCTTCCAGGGGCCCTCTTCTAAATGCCATGGAGATTAACAAGTATCTGGAGAAAAATGATGGCTCTCCTGATGGTGAAGCTATATCTAGTGTACTTTCACACTACTCTTCAGCAGATTGGGCACAAGAAGGGGGTGACCCATGTTTACCTGTTCCATGGTCATGGGTCCGCTGTAGCTCAGATCTACAGCCAAGAATAGTTTCAATTTTGTTGTCTAATAAAAACTTGACGGGCAATATTCCTTTGGACATCACCAAATTGACTGGTCTGGTTGAATTATGGCTTGATGGAAATATGCTGACTGGTCCAATACCAGATTTTACTAGATGCATGGACTTGAAGATCATTCATCTTGAGAACAATCAGTTGACGGGTGCGCTCCCAACCTCTTTGGTGAACCTTCCTAATTTGAGGGAACTGTATGTCCAAAATAATATGTTATCTGGAACTGTGCCATCAGGTCTTCTGAGCAAAGATTTGGTTTTGAACTACTCTGGAAACATTAATCTCCATAAAGGAAGCAGAAAAACGAGCCACGTGTATGTGATTATTGGTTCAGCAGTTGGGGCTGCCGTTTTACTTTTGGCTACTATTGTGTCTTGTTTGTTCATGCATAAAGGAAAGAGAAGATATTATGAGCAAGACAACCTTATTTCTCTACCGTCTCAAAGTCTGGATTCTAAGAGCGATGGTCCTGCAGAAGCTGCTCACTGCTTCAGCTATGCTGAAATTGAAAATTCTACAAATAATTTTGAGAAAAAAATTGGTTCTGGAGGATTTGGAGTTGTTTACTATGGGAAACTGAAAGATGGAAAAGAGATAGCAGTTAAAGTTCTAACCAGTAATTCCTATCAAGGCAAACGAGAGTTCTCCAATGAGGTATCTCTTCTTTCAAGAATACATCACAGAAACTTGGTACAGCTTCTTGGGTATTGCCGAGAGGAAGGGAATAGTTTGCTTATTTATGAGTTCATGCACAATGGAACTCTCAAGGAACATCTTTATGGCCCATTAACACATGGACGAAGTATCAATTGGATTAAGCGCCTTGAGATTGCAGAAGATTCTGCCAAAGGGATTGAATATCTTCACACAGGCTGCGTTCCTGCAGTTATCCATAGAGACTTGAAAAGCAGCAACATTCTTCTTGACAAGCACATGAGAGCCAAAGTTTCAGATTTTGGTCTTTCAAAACTTGCAGTTGATGGAGTCTCTCATGTCTCTAGCATAGTTCGGGGGACAGTAGGATACCTGGATCCTGAGTACTATATTTCCCAGCAGCTGACTGACAAGAGTGATATTTATAGTTTTGGCGTAATTCTTCTTGAACTCATATCTGGTCAAGAAGCAATATCTAATGACAGCTTTGGTGCTAATTGCCGAAACATAGTCCAGTGGGCAAAATTACACATTGAGAGTGGAGATATACAAGGTATCATAGATCCGGCGCTAGGAAACGAGTATGACCTACAATCAATGTGGAAAATAGCAGAGAAAGCATTGATGTGCGTTCAACCTCATGGACATATGCGGCCATCAATTTCAGAAGTTCTGAAGGAGATCCAAGATGCAATCTCTATTGAGAGAGAGGCCGAAGCCAATTCGCCTAGAAATTCTGTTCACTCTTCCATCAATATGGGTTCTATGGATCTCGCTGCAACCGAAAATTACCTCTCAATTGATGAATCCATTGCACAGCCTACTGCACGATAG 2763 0.4054 METMLPFFLSSLSLLLLLLLPLSSSQMPGFVSLDCGGKENFTDEIGLKWTPDDKITYGEISTILVANETRKQYTTLRHFPADSRKYCYTLNVVSRTRYLLRATFLYGNFDSNNVYPKFDISVGATHWSTIVISDANTIEVRELIFLASSPTVSVCLSNATTGKPFISTLELRQFNGSVYYTYYEEQFYLSVSARINFGAESDAPIRYPDDPFDRIWESDSVKKANYLVDVAAGTKKISTKVPIDVNRDEMPPVKVMQTAVVGTNGSLTYRLNLDGFPGIGWAFSYLAEIEDLAQNETRKFRLVLPGQPDVSKAVVNIEENAPGKYRLYEPGFNNLSLPFVLSFRFGKTSDSSRGPLLNAMEINKYLEKNDGSPDGEAISSVLSHYSSADWAQEGGDPCLPVPWSWVRCSSDLQPRIVSILLSNKNLTGNIPLDITKLTGLVELWLDGNMLTGPIPDFTRCMDLKIIHLENNQLTGALPTSLVNLPNLRELYVQNNMLSGTVPSGLLSKDLVLNYSGNINLHKGSRKTSHVYVIIGSAVGAAVLLLATIVSCLFMHKGKRRYYEQDNLISLPSQSLDSKSDGPAEAAHCFSYAEIENSTNNFEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFSNEVSLLSRIHHRNLVQLLGYCREEGNSLLIYEFMHNGTLKEHLYGPLTHGRSINWIKRLEIAEDSAKGIEYLHTGCVPAVIHRDLKSSNILLDKHMRAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDIYSFGVILLELISGQEAISNDSFGANCRNIVQWAKLHIESGDIQGIIDPALGNEYDLQSMWKIAEKALMCVQPHGHMRPSISEVLKEIQDAISIEREAEANSPRNSVHSSINMGSMDLAATENYLSIDESIAQPTAR. 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05421 920 Pfam Protein tyrosine and serine/threonine kinase 601 801 IPR001245 GO:0004672|GO:0006468
Seca8g05421 920 FunFam Leucine-rich repeat protein kinase family protein 376 526 - -
Seca8g05421 920 PANTHER OS07G0107800 PROTEIN-RELATED 461 875 - -
Seca8g05421 920 CDD STKc_IRAK 605 872 - -
Seca8g05421 920 SUPERFAMILY Protein kinase-like (PK-like) 585 878 IPR011009 -
Seca8g05421 920 Gene3D Transferase(Phosphotransferase) domain 1 675 896 - -
Seca8g05421 920 Pfam Malectin-like domain 33 363 IPR024788 -
Seca8g05421 920 ProSitePatterns Protein kinases ATP-binding region signature. 605 627 IPR017441 GO:0005524
Seca8g05421 920 Gene3D Phosphorylase Kinase; domain 1 573 674 - -
Seca8g05421 920 ProSitePatterns Serine/Threonine protein kinases active-site signature. 721 733 IPR008271 GO:0004672|GO:0006468
Seca8g05421 920 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 675 884 - -
Seca8g05421 920 SMART serkin_6 599 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g05421 920 Gene3D Ribonuclease Inhibitor 376 528 IPR032675 -
Seca8g05421 920 FunFam Leucine-rich repeat receptor-like protein kinase 576 674 - -
Seca8g05421 920 SUPERFAMILY L domain-like 401 508 - -
Seca8g05421 920 ProSiteProfiles Protein kinase domain profile. 599 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05421 Seca-Chr8 145200790 145207480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05421 23 709 Receptor kinase-like Gene Family AT2G37050 69.065 0.0 1009
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Seca8g05421 Malectin_like 6.8e-76 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05421 - - gmx:100798007 1642.86