Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05413 ATGGGGAGGAAGGGAAATTGGTTTTCCTCTGTGAAGAAAGCTCTCAGCCCTGAGTCAAAGGAGAAGAAAGAACAGAAATCAAGCGGATCAAAGAAGAAATGGTTTGGGAAGCAAAAATTGCAGACTTCAGAATCATACTCGGAAACGGATAGAGCACCTCCTCCTCCTCCACCTGAAGAGATTATTTTAACTCATGTTGAGGATGAAAACAGTCATGATCATGATCACGTTGAAGTTGCAACTGCTATAGATGCTGAGAGGCCTGTTCCTGCTGTTCAGACAGAAGTTGCTGAGGTTCAAGCCACTATAATTGCTCAGCCTGCCTGTAAACCAAAGGATGAAGTGGCAGCGGTCAAGATTCAAACAGCTTTTCGGGGATACATGGCAAGAAGAGCATTGCGGGCTTTAAGGGGGCTGGTCAGGTTGAGATCACTGATGGAAGGGCCAGTGGTGAAACGACAAGCCATTAGTACCCTCCGCTCTATGCAGACATTAACTCATGTGCAATCTCAGATTCGTTCTAGGAGGCTCAGGATGTTAGAGGAGAATCAAGCTCTGCAAAAACAGCTCCTACAGAAGCACACAAAAGAACTAGAAAGCATGCGGATTGGGGAGGAATGGGATGACAGCCTACAATCCAAGGAACAAATTGAAGCCAAGTTACTAAGCAAGTATGAGGCTGCTATGAGAAGAGAAAGAGCAATGGCTTATTCATTCTCTCATCAGCAAAACGGGAAGAACTCATCGAGATCTATGAACCCAATGTTCATGGATCCAACCAATCCTACCTGGGGTTGGAGCTGGTTGGAACGATGGATGGCAGCGCGGCCTTGGGAGAGCAATAGCCAGGTGGAGAAAGAGAAGAATGACCATTCATCTGTAAAAAGTTCAAGTCGCGGCATTACCAGTGCTGAAATCAGCAAATCATTTGCTCGTTTCCAGCTCAATTCTGAAAGGAATTCTCCAACTGCCAGCCAAGCTCCAGGCTCACCTAACTTCCAGTCCCATTCAACTCCTTCCAAGCCAGCAGCTGGTAAGAAAGTGAAGAAGGCAAGTCCAAAGGACAACTTGGTTATGGATGATGACACCAAAAGCATGGTGAGTGTGCAGTCAGACCGGCTCCGAAGGCACTCCATTGCTGGATCAATAGTGAGAGATGATGAAAGCCTTGCAAGCTCTGCATCAGTTCCAAGTTACATGGTGCCAACTAAATCTGCAAAAGCAAAGTCCAGGATGCAAAGTCCATTAGCTCCTGTAGAGAATGGAACACCAGAGAAGGGGTCCTTTGGGACTGCAAAGAAACGCCTCAGTTTCCCAGCTTCACCTGCCAGACCAAGGCGGCATTCAGGTCCACCAAAGGTAGAAAGCAGCTTGAATGCAGAAATCACTGTTGGCAATGGTGTGGCTGCTTGA 1413 0.4706 MGRKGNWFSSVKKALSPESKEKKEQKSSGSKKKWFGKQKLQTSESYSETDRAPPPPPPEEIILTHVEDENSHDHDHVEVATAIDAERPVPAVQTEVAEVQATIIAQPACKPKDEVAAVKIQTAFRGYMARRALRALRGLVRLRSLMEGPVVKRQAISTLRSMQTLTHVQSQIRSRRLRMLEENQALQKQLLQKHTKELESMRIGEEWDDSLQSKEQIEAKLLSKYEAAMRRERAMAYSFSHQQNGKNSSRSMNPMFMDPTNPTWGWSWLERWMAARPWESNSQVEKEKNDHSSVKSSSRGITSAEISKSFARFQLNSERNSPTASQAPGSPNFQSHSTPSKPAAGKKVKKASPKDNLVMDDDTKSMVSVQSDRLRRHSIAGSIVRDDESLASSASVPSYMVPTKSAKAKSRMQSPLAPVENGTPEKGSFGTAKKRLSFPASPARPRRHSGPPKVESSLNAEITVGNGVAA. 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05413 470 Pfam IQ calmodulin-binding motif 116 134 IPR000048 GO:0005515
Seca8g05413 470 MobiDBLite consensus disorder prediction 1 61 - -
Seca8g05413 470 MobiDBLite consensus disorder prediction 317 366 - -
Seca8g05413 470 PANTHER IQ-DOMAIN 5-RELATED 1 451 - -
Seca8g05413 470 MobiDBLite consensus disorder prediction 317 341 - -
Seca8g05413 470 MobiDBLite consensus disorder prediction 280 301 - -
Seca8g05413 470 MobiDBLite consensus disorder prediction 15 31 - -
Seca8g05413 470 Pfam Protein of unknown function (DUF4005) 339 448 IPR025064 -
Seca8g05413 470 MobiDBLite consensus disorder prediction 348 366 - -
Seca8g05413 470 MobiDBLite consensus disorder prediction 34 49 - -
Seca8g05413 470 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Seca8g05413 470 Coils Coil 177 197 - -
Seca8g05413 470 SMART iq_5 112 134 IPR000048 GO:0005515
Seca8g05413 470 MobiDBLite consensus disorder prediction 402 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05413 Seca-Chr8 145107497 145112038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05413 1 470 IQD Protein Family AT5G03040 51.667 1.75e-144 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05413 - - gmx:100799058 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05413 8 145107497 145112038 Seca8g05413 8 145107497 145112038 ECH
Seca8g05413 8 145107497 145112038 Seca2g04595 2 132027378 132031935 PCT