Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05403 ATGGAAGTGTCTCGTTTTTGTTACACCCAGGATTCTGATTCAAAAGGGTTCAACCCGGCATTAATTGTTCTCCTGGTTGTCGCTGGGTTGCTGTTGGTATTCCTCGTTGGAAATTATGTACTCTACTCATACGCACAGAAGACCCTCCCTCCTAGAAAAAAGAAGCCAATCTCGAAGAAGAAGATGAAAAAGGAGAGACTGAAGCAAGGCATCTCGGCACCTGGGGAGTAG 231 0.4589 MEVSRFCYTQDSDSKGFNPALIVLLVVAGLLLVFLVGNYVLYSYAQKTLPPRKKKPISKKKMKKERLKQGISAPGE. 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05403 76 MobiDBLite consensus disorder prediction 52 66 - -
Seca8g05403 76 Pfam DNA binding protein S1FA 12 76 IPR006779 GO:0003677|GO:0005634|GO:0006355
Seca8g05403 76 PANTHER DNA-BINDING PROTEIN S1FA2 9 76 IPR006779 GO:0003677|GO:0005634|GO:0006355
Seca8g05403 76 MobiDBLite consensus disorder prediction 49 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05403 Seca-Chr8 145038094 145038324 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Seca8g05403 S1FA 1.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05403 - - gmx:100499820 102.834