Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05402 ATGGCTGCAAATTTAAAGCCACGTTTTAATACATGTTCCCTCTTTCTATTGCTTCTCTTGCATTTTAATTTGGGTAGAAGCCAACTTGAGGTGAACTATTACTCAGACACGTGTCCAAAAGCGGAAGAGATAATCAAGCAACAAGTCATCGAGCTATACAACAAGCATGGAAACACAGCCGTTTCATGGGTTAGAAATCTCTTTCATGATTGTGTAGTCAAGTCATGCGATGCATCCCTACTGTTAGCGACGGTGGGCGATGTAGTGTCGGAGCAGACATCGGAGAGAAGTTTTGGGATGAGAAACTTCAAGTACATCAACACCATCAAAGCCGCCCTTGAGAGAGAATGCCCCTTGACAGTTTCATGTGCTGACATTGTTGCTCTTTCTGCTAGAGATGGCATTGTCATGGGTGCGTGGGTGCAGTTGGGAGGTCCAAGGATCGAAATGAAGACAGGGCGAAAGGATAGCAAAGAAAGCTATACAACGGTGCTGGAAAACTTCATTCCCAATCACAATGACTCCATTTCCTTAGTGCTTTCTCGTTTTCAAGCCATTGGCATTGACACTCAAGCCACAGTCGCTCTTTTAGGAGCACACTCGGTGGGAAGAGTTCATTGCATGAATCTGGTGCACAGGCTATACCCCACAGTGGATGAAACTCTGGACCCTGCACATGCAGAGTACCTGAAACGACGGTGCCCAACACCGAATCCGGATCCAAAGGCTGTGTTATATGCGAGGAATGACCTGAAAACGCCGATGATAATTGACAACAACTACTACAAGAACATATTGCAACACAAGGGACTGTTGACTGTGGATGAAGAACTGGCCACTGACCCAAGAACCGCACCTTATGTCCAAAAAATGGCAGATGACAATGAATACTTCTACCAACAATTCTCAAGGGCCATTCTTTTGTTATCGGAGAACAATCCTCTCACTGCAGATCAAGGTGAAATCAGAAAGGATTGTCGCTTTGTCAATGCCAATTAG 999 0.4515 MAANLKPRFNTCSLFLLLLLHFNLGRSQLEVNYYSDTCPKAEEIIKQQVIELYNKHGNTAVSWVRNLFHDCVVKSCDASLLLATVGDVVSEQTSERSFGMRNFKYINTIKAALERECPLTVSCADIVALSARDGIVMGAWVQLGGPRIEMKTGRKDSKESYTTVLENFIPNHNDSISLVLSRFQAIGIDTQATVALLGAHSVGRVHCMNLVHRLYPTVDETLDPAHAEYLKRRCPTPNPDPKAVLYARNDLKTPMIIDNNYYKNILQHKGLLTVDEELATDPRTAPYVQKMADDNEYFYQQFSRAILLLSENNPLTADQGEIRKDCRFVNAN. 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05402 332 Pfam Peroxidase 46 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g05402 332 FunFam Peroxidase 32 178 - -
Seca8g05402 332 SUPERFAMILY Heme-dependent peroxidases 28 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca8g05402 332 PANTHER - 14 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g05402 332 Gene3D - 32 330 - -
Seca8g05402 332 Gene3D Peroxidase, domain 2 170 309 - -
Seca8g05402 332 ProSiteProfiles Plant heme peroxidase family profile. 28 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g05402 332 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g05402 332 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g05402 332 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g05402 332 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g05402 332 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g05402 332 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g05402 332 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g05402 332 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g05402 332 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g05402 332 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g05402 332 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g05402 332 FunFam Peroxidase 170 309 - -
Seca8g05402 332 CDD secretory_peroxidase 28 329 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05402 Seca-Chr8 145024480 145026738 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05402 31 330 Peroxidase AT2G37130 73.422 7.37e-169 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05402 K00430 - gmx:100811277 558.14