Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g05394 | ATGAAGTTTTCCCTTTTCGGTTGTTTCTCCGCATCGACCATAGACAAAAACAACAACGACTTTGCAGAAGGAGAGAATGATGGAGGCTTTCGTGTATTCACATATAACCAATTGAAATCAGCCACTGGTAATTTTAATGAGAAGATTGGAGAAGGTGGATTTGGCTCTGTTTATAAGGGGAGGCTTAGAGATGGCACTTTTGTAGCAGTGAAAGTGCTTTCCATTGAGCTCGAATCCATGCGAGGAGAGAGGGAATTCGTTGCAGAATTAGCAACACTCGCAAATATCAAGCACCAAAATCTAGCCACCCTTCAAGGGTGTTGTGTGGAAGGTGCACACAGATATTTGGTCTATGATTACATGGAGAACAACACACTCTACCACGCTTTCTTAGGTTCGGAGGATAGAAGGATGAGATTCAGTTGGGAAACAAGGAAGGACATATCCATAGGTGTGGCCCGGGGGCTTGTTGTTCTCCATGAGGAGCTTAGGCCCCATATCGTACATAGAGACATCAAAGCCAAAAATATACTTCTTGATCAGAATTTTACACCTAAAGTTTCAGACTTTGGTTTGGCAAAATTACTGAGAGATGAAAAATCTCACATCAGTACTCAAGTTGCAGGGACATTGGGTTATTTGGCTCCAGAGTATGCCAATTCTGGAAGGTTGACACGAAAATCAGATGTATATAGCTTCGGAGTGTTACTTTTACAAATTATCAGTGGCCTAGCAGTTGTAGATGCTTATCAAGATATTGAGCGGTTCATTGTAGAGAAGGCTTGGGCAGCTTATGAGACTAATGATCTATTAAGAATGGTTGATCCTGTGCTTAATATGAACTTTCCTATGGAAGAAGCTATAAAATTCCTCAAGGTGGGACTGCTTTGCGTGCAAGAAACCGCAAAGCTTCGGCCACGAATGTCAGAGGTTGTGGAAATGTTGACCAATAGAATTAATATGAAAGACGTTCACATTGCAAAACCAGGGTTTGTTGCTGACCTCAGGAACATCAAAATCAAGCAACAAGCATCAGTACACTCACCACAGGAATCAAGTTCAGCTGGAGCAAGCTTTGCAAGCTCCATTTGGAGTATGGCCAATCTTGCTCGTTAA | 1116 | 0.4211 | MKFSLFGCFSASTIDKNNNDFAEGENDGGFRVFTYNQLKSATGNFNEKIGEGGFGSVYKGRLRDGTFVAVKVLSIELESMRGEREFVAELATLANIKHQNLATLQGCCVEGAHRYLVYDYMENNTLYHAFLGSEDRRMRFSWETRKDISIGVARGLVVLHEELRPHIVHRDIKAKNILLDQNFTPKVSDFGLAKLLRDEKSHISTQVAGTLGYLAPEYANSGRLTRKSDVYSFGVLLLQIISGLAVVDAYQDIERFIVEKAWAAYETNDLLRMVDPVLNMNFPMEEAIKFLKVGLLCVQETAKLRPRMSEVVEMLTNRINMKDVHIAKPGFVADLRNIKIKQQASVHSPQESSSAGASFASSIWSMANLAR. | 372 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g05394 | 371 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 30 | 352 | - | - | |
Seca8g05394 | 371 | FunFam | serine/threonine-protein kinase PBS1-like | 12 | 120 | - | - | |
Seca8g05394 | 371 | SUPERFAMILY | Protein kinase-like (PK-like) | 28 | 329 | IPR011009 | - | |
Seca8g05394 | 371 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 167 | 179 | IPR008271 | GO:0004672|GO:0006468 | |
Seca8g05394 | 371 | Gene3D | Transferase(Phosphotransferase) domain 1 | 121 | 330 | - | - | |
Seca8g05394 | 371 | Gene3D | Phosphorylase Kinase; domain 1 | 13 | 120 | - | - | |
Seca8g05394 | 371 | SMART | serkin_6 | 43 | 291 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g05394 | 371 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 121 | 327 | - | - | |
Seca8g05394 | 371 | Pfam | Protein kinase domain | 46 | 312 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g05394 | 371 | CDD | STKc_IRAK | 49 | 317 | - | - | |
Seca8g05394 | 371 | ProSiteProfiles | Protein kinase domain profile. | 43 | 319 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g05394 | 371 | ProSitePatterns | Protein kinases ATP-binding region signature. | 49 | 71 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g05394 | Seca-Chr8 | 144928348 | 144930485 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca8g05394 | 32 | 334 | Receptor kinase-like Gene Family | AT1G56120 | 49.673 | 2.28e-93 | 296 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Seca8g05394 | Pkinase | 2.6e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g05394 | - | - | gmx:100813945 | 583.948 |