Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05390 ATGGCATCCAACAGGGGTCAAGGTGGAATTCAGCAGTTGTTGGCTGCTGAACAAGAAGCACAACGGATTGTAAATGCTGCAAAAGCTGAAAAATTGGCTAGGTTGAAACAGGCCAAAGAAGAGGCTGAAAAGGAGGTTACTGAATACCGGGCTAAGCTAGAGCTTGAGTTTCAAAAGAAAGTTTCAGATAGTAGCGGAGATTCTGGAGCTAATGTCAAGCGACTTGAGGTAGAGACTGAAGCAAAAATCCATCACCTGAAAAAGGAGGCTGCAAGGATATCGGATGATGTTGTCGCCATGCTCCTTAAGTACGTAACTAGTGTGAAAAATTAG 333 0.4384 MASNRGQGGIQQLLAAEQEAQRIVNAAKAEKLARLKQAKEEAEKEVTEYRAKLELEFQKKVSDSSGDSGANVKRLEVETEAKIHHLKKEAARISDDVVAMLLKYVTSVKN. 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05390 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Seca8g05390 110 Coils Coil 10 59 - -
Seca8g05390 110 NCBIfam V-type ATPase subunit G 3 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Seca8g05390 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
Seca8g05390 110 Gene3D - 1 110 - -
Seca8g05390 110 FunFam V-type proton ATPase subunit G 3 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05390 Seca-Chr8 144879896 144884017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05390 1 110 Primary Pumps ATPases(2) AT3G01390 71.818 9.68e-44 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05390 K02152 - gmx:100306550 187.578