Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05357 ATGCAGTTCATTGCCAATCAGTTTGCAATGAAGTGTTTTACATTCTACTTTGGAGAGAAGAAGGATGATCCTAAGAATTTGCAGTCAATATCAGGCCGGTCCAACAGTTCTACTTATGCTGAGGGTGAGGTGAAAAGAACTGCTTCTGAATTAAATTCTCTGGATGCCTCAGACAATAGCACAGACTCTCTCAGGAGAAATGCATTTCCTAATTTGTCTCAAAGGCCCAGCAACCTCAGAGTATTTACTGTGTCTGAACTGAAATCAGCTACCAAGAATTTTAGTCGCTCTGTTATGCTTGGAGAGGGTGGGTTTGGATGTGTCTACAAAGGATTGATCAAGAGTGTAGATGATCCTTCCAGAAAAATTGAAGTTGCAGTTAAACAACTTGGTAGAAGAGGAATTCAGGCAAGTACCTTTTCCTCTACATTACAATGTGTGTGTTACTTTTCTTTTGGCTTGCAGGGGCATAAGGAATGGGTAACAGAAGTGAATGTTCTGGGTATTGTTGAGCATCCCAATCTTGTGAAACTAGTGGGCTACTGTGCTGATGATGATGAAAGAGGAATCCAGAGGCTTCTGATTTATGAATATATGCCCAACAGAAGTGTGGAATATCATTTATCCCCGCGATCAGAAACTTCTCTTCCATGGATTAGGAGATTGAAAATAGCCCAAGATGCAGCTCGTGGCTTAACATACCTGCATGAGGAAATGGAATTTCAGATAATTTTCAGAGATTTCAAATCTTCAAATATCCTTCTGGATGAGCATTGGAATGCAAAGCTGTCAGACTTCGGGTTAGCAAGATTGGGACCATCTGATGGATTAACTCATGTCTCAACAGCGGTTGTAGGAACAATGGGGTATGCAGCTCCTGAGTATATTCAAACTGGGCGTCTCACATCAAAGAGTGATGTATGGAGCTATGGTGTCTTCCTTTATGAACTCATTACTGGCAGGCGCCCTTTAGATCGAAATCGCCCCAAGGGTGAGCAGAAGCTGTTGGAATGGATAAGGCCATACCTTTCAGATGGGAAGAAATTTCAATTAATATTGGATCCAAGACTTGAGAGGAAACACCTCTTTAAGTCAGCTCAAAGACTTGCTATAATAGCTAACAGATGCTTGGTCAGAAACCCAAAGAATCGCCCAAAGATGAGTGAAGTATTAGAAATGGTGAGTCGGATTGTGGAGTCTTCTGTGAGTGCTAATCAACACCCACCCTTGAAGAGTCTATCCCCAGCAGAGGCTTCTCAGGACACTGAAGTAAAGAACAAGAAAAGGATCTTGGAGCCATATTGTAATTGGTTTAGGGTGTGGAGACCAAAGCTTTTAAGAGCATGTTGA 1350 0.4193 MQFIANQFAMKCFTFYFGEKKDDPKNLQSISGRSNSSTYAEGEVKRTASELNSLDASDNSTDSLRRNAFPNLSQRPSNLRVFTVSELKSATKNFSRSVMLGEGGFGCVYKGLIKSVDDPSRKIEVAVKQLGRRGIQASTFSSTLQCVCYFSFGLQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEYHLSPRSETSLPWIRRLKIAQDAARGLTYLHEEMEFQIIFRDFKSSNILLDEHWNAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYIQTGRLTSKSDVWSYGVFLYELITGRRPLDRNRPKGEQKLLEWIRPYLSDGKKFQLILDPRLERKHLFKSAQRLAIIANRCLVRNPKNRPKMSEVLEMVSRIVESSVSANQHPPLKSLSPAEASQDTEVKNKKRILEPYCNWFRVWRPKLLRAC. 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05357 449 CDD STKc_IRAK 100 397 - -
Seca8g05357 449 ProSiteProfiles Protein kinase domain profile. 94 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g05357 449 PANTHER OS01G0588500 PROTEIN-RELATED 56 396 - -
Seca8g05357 449 ProSitePatterns Protein kinases ATP-binding region signature. 100 128 IPR017441 GO:0005524
Seca8g05357 449 Pfam Protein kinase domain 96 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g05357 449 Gene3D Transferase(Phosphotransferase) domain 1 199 412 - -
Seca8g05357 449 MobiDBLite consensus disorder prediction 402 424 - -
Seca8g05357 449 FunFam Serine/threonine-protein kinase PCRK2 199 408 - -
Seca8g05357 449 Gene3D Phosphorylase Kinase; domain 1 67 198 - -
Seca8g05357 449 MobiDBLite consensus disorder prediction 402 420 - -
Seca8g05357 449 SUPERFAMILY Protein kinase-like (PK-like) 71 394 IPR011009 -
Seca8g05357 449 MobiDBLite consensus disorder prediction 52 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05357 Seca-Chr8 144381208 144384012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05357 10 426 Glycoside Hydrolase AT3G07070 39.767 1.80e-90 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Seca8g05357 Pkinase 2.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05357 - - gmx:100305438 753.436