Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05349 ATGATTTTGAGTGCTAGGTATGTATGTAACAAAGAAGGTTTTCGTAAGCTGGACAAAAGAGCTAGCGTATCAACTAACCGTCGACATCAAACAAGAACCGAATGTCCTGTAAAGATGGGAATCAAATACAAGAAAGAGATCGGGAAGTGTCAAATTCATGATTTTGTTGATAAGCATAACCATCCTTTGCACCTTCCAGAGACGACTCACATTCTTACATCTCAGCGAAAATTATTTGAAGTTCAAGCTCATGAAATTGATTTGGCAGACGATTCAGGCATTAAGCAAAGGGCCATATTTGAGCTAATGAGTAAGCAAGCTGGTGGCAGAGAAAACCTTGGTTACACACGTTCGGATCAAAAGAATTATCTTCGTAGCAAAAGATTGAGAAATATGACATACGGGGAGGCTAGAAGCTTATTACAAGACTTTCAACAAAAATCTATAGAAAACCCATCATTCTATCACAGGGTCCAATTAGATGTTAAAGAACAAATAACAAATATTTTTTGGGCAGATGCACGAATGATAATGGATTATGAATACTTTTGTGATGTGGTCACTCTTGACACTACATACAGTACTAATAATGCATATAGACCTTTGTCTGTGTTCGCAGGATTTAATCACTTTAGAGGAGTGGTAGTTTTTGGAGCATCATTTGAATGGTTGTTTAGAGAATTATTGAAGGCACATAAAAACAAGAAGCCTCAAACTCTTTTCACGGATCAAGACCATGCAATGGCTGAAGCTTTGCATAAGATAATGCCTGAAACATATCATGGTCTATGTTATTGGCATTTAATGCAAAATGGCATAAAACATATTGGTAATTTGATGAAGAATGGTTCTAATTTTTTGAGAGACCTTAAGTTGTGCACGTACAAATATGTAGAAGAAGTTGATTTTCAAAGGGTGTGGGATAAATTGATAGATGATTATAAAGTTAAAGAAAGTGGGTGGATATCAAATTTCTATAAAGTAAAGGAAAAATGGGCAAAGTGTTACATGAAAAATGCTTGCACTATTGGCATGCAAAGCACACAGCTTAGTGAAAGCTTCAATGCAGATTTGAAAACTTGCTTGAAACCAGACTTGGACATAATCCAATTTTTCAAACACTTTGATAGGGTGGTTAATGACAAAAGATATAATGAGTTGCAGTGTGAGTTTGAGTCTAGGCAAAAATTACCAAGATTGAAGATGGAACATTCACCTTTATTGAGACAGGTTCTGGATGTCAAAGATATTAAATTAATACCTAATCAGTATATTTTGAAAAGATGGACAAGGGGAGCAAAGAATGGATGTGTGAAAGATGCACATGGAAGAAATGTCCAGGAAGATGTAAATCTTGACAACACAAATTGGTATAGAGAGGTTTGTCCTAAATTAGTGAGAGTAGCTACACGTGCATCTGATTGTAAGGAAGCGTGTATCATTGTGGAAAAGGGTATACAAGAATTGAGTAAGCAAGTTGAGGATATTTGTGGAAAAAATTTGAGTTTGGTAAATAACAATGTTAATCCTTCTTCTTTTGTCCCAAATACCAACAATCATTCTCTACAAGTTAAAGGGTTAAAAACAAGAAATGGTGTGAAGAATTGTAGAAAACGTCCAAAGAGTTGGGTTGAGAACCAATCAAAGAAGAAAAGAATCAAATCTCTAGTGCTTCACAAAATGGAGAGATCATGCTCTCACCAACAACTTCAAAAAAGTACTCATGGTTTTACTAGACTATTAGTGGAACCACTTGATGATGCTTTACTCCAATCATTGAGTGCTAACTTCAACCAAGTATCAAATCATATGCCAGCATGGCTTCCTCAACAACACCATGGTGATTCATTTTAA 1854 0.356 MILSARYVCNKEGFRKLDKRASVSTNRRHQTRTECPVKMGIKYKKEIGKCQIHDFVDKHNHPLHLPETTHILTSQRKLFEVQAHEIDLADDSGIKQRAIFELMSKQAGGRENLGYTRSDQKNYLRSKRLRNMTYGEARSLLQDFQQKSIENPSFYHRVQLDVKEQITNIFWADARMIMDYEYFCDVVTLDTTYSTNNAYRPLSVFAGFNHFRGVVVFGASFEWLFRELLKAHKNKKPQTLFTDQDHAMAEALHKIMPETYHGLCYWHLMQNGIKHIGNLMKNGSNFLRDLKLCTYKYVEEVDFQRVWDKLIDDYKVKESGWISNFYKVKEKWAKCYMKNACTIGMQSTQLSESFNADLKTCLKPDLDIIQFFKHFDRVVNDKRYNELQCEFESRQKLPRLKMEHSPLLRQVLDVKDIKLIPNQYILKRWTRGAKNGCVKDAHGRNVQEDVNLDNTNWYREVCPKLVRVATRASDCKEACIIVEKGIQELSKQVEDICGKNLSLVNNNVNPSSFVPNTNNHSLQVKGLKTRNGVKNCRKRPKSWVENQSKKKRIKSLVLHKMERSCSHQQLQKSTHGFTRLLVEPLDDALLQSLSANFNQVSNHMPAWLPQQHHGDSF. 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05349 617 Pfam MULE transposase domain 186 271 IPR018289 -
Seca8g05349 617 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 495 IPR031052 GO:0006355
Seca8g05349 617 Pfam FAR1 DNA-binding domain 2 63 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05349 Seca-Chr8 144317982 144320291 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g05349 MULE 9.5e-17 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05349 - - adu:107465301 625.165