Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05337 ATGGCAGATGAAGTTAGGAAAGGATATTTTGCTGTTGTTGCAATGAAGGATGGAGAAACCAAGAGGTTTGTTGTTGCATTGGACTACTTGAGTGATCCTGCATTCATAAGACTGCTAGACCAAGCTCGGGAAGAGTATGGATATTTTGCAGTTGTTGCAATGAAGGATGGAGAAACCAAAAAGTTCATTGTTGGGTTAAATTATTTAACTGATCCCGCATTCTTAGGTCTACTGGACCAAGCTCGGGAAGAGTATGGCTTCGTACACAAGGGAGCTCTTGCACTCCCTTGTCGGCCTCAAGATTTACAGAACATTCTAGATGGTTCAAGAGCGGAAGACTGCTTAGCCGAAGCTACCAGAGATGATGTCAAGAAAGGATATTTTGCTGTTGTTGCAACAAAGGATGGAGATACCAAAAGGTTCATCCTTAAATTAGACTACTTGGCTGATCCTGCATTCATAAGACTGCTAGACCAAGCTCGGGAAGAATATGAAGCTACCAGAGATGATGTTAGGAAGGGATATTTTGCTGTTGTTGCAACAAAAGATGGTGATACCAAAAGGTTCGTTGTTAAATTAGACTACTTGGCTGATCCTGCATTCATAAGACTGCTAGACCAAGCTCGGGAAGAGTATGGTTTCATACAGAAGGGAACTCTTGCTGTTCCATGTCTTCCTCGAGATTTACAGAACATTCTAGACGCTCGGAGATCATAG 717 0.424 MADEVRKGYFAVVAMKDGETKRFVVALDYLSDPAFIRLLDQAREEYGYFAVVAMKDGETKKFIVGLNYLTDPAFLGLLDQAREEYGFVHKGALALPCRPQDLQNILDGSRAEDCLAEATRDDVKKGYFAVVATKDGDTKRFILKLDYLADPAFIRLLDQAREEYEATRDDVRKGYFAVVATKDGDTKRFVVKLDYLADPAFIRLLDQAREEYGFIQKGTLAVPCLPRDLQNILDARRS. 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05337 238 Pfam Auxin responsive protein 117 169 IPR003676 GO:0009733
Seca8g05337 238 Pfam Auxin responsive protein 4 48 IPR003676 GO:0009733
Seca8g05337 238 Pfam Auxin responsive protein 169 233 IPR003676 GO:0009733
Seca8g05337 238 Pfam Auxin responsive protein 47 106 IPR003676 GO:0009733
Seca8g05337 238 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 171 231 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05337 Seca-Chr8 144225683 144245058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05337 170 224 Calmodulin-binding Proteins AT3G43120 41.818 4.69e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05337 - K14488 gmx:100798016 107.842