Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05336 ATGCTTATTAGGTCTTTTGTTGGGAGGATACAAAAGGGTCTCTCACTGTGGCCTGCACGCAGCTACTTCAATAAACATCATGCCACAACTGCTGTGCCGGATGATGTTATGGAAGGATATTTTGCTGTTCTTGCAATCAATGGTGAGGAAACCAGAAGGTTTATTGTTGGGTTAGACTATTTGACTGATCCTGCATTTTTGGGATTACTTGATCAAGCTCAGGAAGAGTATGGACATTTTGTAGTTTTTGCTAACAAGAATGAAGAGTCCAAACGGTTTGTTGTTGATTTACACTATTTGAGTGACCCTGCTTTTCTGGGACTGCTGGAACGGGCAAAAGAAGAGTATGGCTTCAAACAGAAGGGGGCTTTGCTAATTCCTTGCCATCCTCAAGAGCTAGAGAACATTCTAGCTAGAAGGACGAAGAAATTAGACTTGAAGATGTTTAGGTCATTCGCTGGGAAGATACAAAAGCGTCTTTCACACTTTGTACACAGAAGGCCCCCGGGCAAAAGTGTTATGGTGGGAGATGATATGAGGAAAGGATATTTTGCTGTTGTTGCAACAAAAGATGGAGAAACAAAAAGGTTCATTGTTGGGTTAAATTACTTAACTGATCCTGCGTTCTTAGGTCTACTGGATCAAGCTCGGGAAGAGTATGGTTTCGTACAGAAGGGAACTCTTGCAGTCCCTTGTCTGCCTCAAGATTTTCAGAAGATTCTAGATTGTCCAAGACCGTAG 741 0.4224 MLIRSFVGRIQKGLSLWPARSYFNKHHATTAVPDDVMEGYFAVLAINGEETRRFIVGLDYLTDPAFLGLLDQAQEEYGHFVVFANKNEESKRFVVDLHYLSDPAFLGLLERAKEEYGFKQKGALLIPCHPQELENILARRTKKLDLKMFRSFAGKIQKRLSHFVHRRPPGKSVMVGDDMRKGYFAVVATKDGETKRFIVGLNYLTDPAFLGLLDQAREEYGFVQKGTLAVPCLPQDFQKILDCPRP. 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05336 246 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 78 136 IPR003676 GO:0009733
Seca8g05336 246 Pfam Auxin responsive protein 78 138 IPR003676 GO:0009733
Seca8g05336 246 Pfam Auxin responsive protein 28 78 IPR003676 GO:0009733
Seca8g05336 246 Pfam Auxin responsive protein 177 242 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05336 Seca-Chr8 144194767 144208517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05336 178 243 Calmodulin-binding Proteins AT3G43120 42.424 4.83e-10 55.1