Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g05321 | ATGGCTTTCGCTCTGTTTCCCCAAAATCCTCGCCGCCCTTCTCTACGCTTTCATCTGCGTTCTCGGCCTCGCCGCCGTCGCCCGCTGCGATTGTCTCTACCGCCTTCATCTCTCCTCTGTCCACCACCAACAAAGGCGTCAAGAAGAAAATCTTGCGCTCTCTCCCGATCGAAGCTCACCGTGACCGTGGAATCTACAGTGAATTTCTCCGATTGCGCGATCTGCCTGACTGAGTTCTTCACCGTTGACAAAATCCGAGTGCTACCTCGGTGCGACCATGGCTTTCATGTGTCCTGCATCGACGCGTGGCTCAAATCGCATTCTTCGTTCCTTTCATGCCGTCAAATTCTGGTGGTTTCTAGATGCGACAAGTGTGGCAGGATCCCTGCCATTGCCACTGCCAGCTCCAGCACCGCACCACCACCGGATTCTGAAGCCAGATTCAAGTGA | 450 | 0.5467 | MAFALFPQNPRRPSLRFHLRSRPRRRRPLRLSLPPSSLLCPPPTKASRRKSCALSRSKLTVTVESTVNFSDCAICLTEFFTVDKIRVLPRCDHGFHVSCIDAWLKSHSSFLSCRQILVVSRCDKCGRIPAIATASSSTAPPPDSEARFK. | 150 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g05321 | 149 | ProSiteProfiles | Zinc finger RING-type profile. | 72 | 113 | IPR001841 | - | |
Seca8g05321 | 149 | SUPERFAMILY | RING/U-box | 65 | 116 | - | - | |
Seca8g05321 | 149 | Pfam | RING-like zinc finger | 71 | 100 | IPR001841 | - | |
Seca8g05321 | 149 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 41 | 118 | IPR013083 | - | |
Seca8g05321 | 149 | PANTHER | RING-H2 FINGER PROTEIN ATL78 | 70 | 125 | IPR044602 | GO:0016567|GO:0016740 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g05321 | Seca-Chr8 | 143872573 | 143875438 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca8g05321 | 41 | 125 | C3H Transcription Factor Family | AT1G76410 | 56.667 | 4.51e-26 | 95.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g05321 | - | - | gmx:100794614 | 141.354 |