Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05304 ATGAATACCTTCTTCTACCATGTCCTTTCTGGCGGGTGGTTCATGGTCTTCGCCTCTTGTCTAATCATGGCCGTTTCAGGATCAACCTACATATTTAGTCTGTACTCAAACGAAGTGAAAACCTCTTTGGGTTACGACCAATCCACTCTGAACTTGATCAGCTTCTTCAAAGACCTTGGTGCCAATGTTGGAATCATCTCAGGTTTAATCAGTGAGATAGCCCCTCCCTGGGCAGTACTAGCCATAGGGGCCACTATGAACTTCTTGGGATACTTCATGATATGGCTTTCTCTGACTCAACGCATTGCCAAACCACAAGTTTGGCAAATGTGTCTCTATTTTTACATTGGTGCTAATTCACTGCCTTTTGCCAATACTGGTGCCTTGGTTTCCTGTGTCAAAAGCTTCCCACAAAACCGTGGCACTGTTATTGGGTTGCTAAAGGGTTATATGGGTCTTAGTGGTGCCATTTTAACTCAGCTCTACCATGCCTTCTTTGGTCATGACAATCTCAAAGCTCTTATCTTTCTCATTGGTTGGTTTCCTTCTGCCATTTTATTCATCTTCCTTCCATCAGCTCGGGTATTGAACCCAATCCCACAACCACAACACAAGGAGCTCAAGGTCTTTTACAAATTTCTATATACTTCACTTGGTCTTGCAGGGTTTCTCATGGTGTTGATCATCCTACAGAAGAAGTTCAGTTTTACAAGGATTGAGTATGTAGTGGATGGCATGGTGGTTCTTTTCTTACTTTTTCTCCCACTTGCTGTGGTGTTTCAAGAGGAGTTCAAACTCTGGAAGACTCAAAACCAAACCTTCACAGATGCTTCCCCTTCAACTTCAAGTGTGGAATTGCAATTGCAATCACAGGAAAGGAAAGTTCCTTGTTTGAGCAACATACTCAAACCACCAAACAGGGGTGAGGACTTCACCATCTTACAAGCTCTGTTGAGTATTGACATGTTGATTCTGTTACTAGCAGCAATGCTTGGTATTGGAGGAACATTAACTGCACTTGACAATTTAGGACAGATTGGGAACTCATTGGGGTACCCAAGAAAGAGCCTCACCATTTTTGTGTCCCTTGTGAGTATATGGAACTATCTTGGAAGAGTAGTGTCTGGTTATGCCTCTGAAATCTTACTGACCAAATATAAATTCCCTCGTCCCTTGATGTTCACAATAGTTATGCTTCTCTCTTGTGTTGGTCATCTTCTAATAGCTTTTGGCATCCCAAACTCCCTCTACTTTGCTTCAGTGATTACTGGGTTTTGCTTTGGCTCTGTGTGGCCGTTAATGTTTTCCATCATCTCTGAATTATTTGGCCTCAAACACTACTCTATGTTGCTCAATTTTGGAGTCACGGCAAGCCCTCTTGGGTCTTACATACTGAACGTGAGAGTCACTGGTTATTTGTATGATAAGGAGGCTATGAAACAATTGGGGATGAAGGGACTCACAAGACAAGCAGGGAAGGAGTTAAGTTGCTTGGGAGTAGAGTGTTATAGGATGGCTTTTATCATAATCACAGTATCAACTTTGGTTGGATGTTTTGCTTCTTTTATTTTGGTGTTAAGGACTAGAGAATATTACAAAGGTGACATTTATAAAAAGTTCAGGGGGGAACCACAGATAACAGAGACTTTTGCAACATTAAGCAGTACTAATGCCTGCCACCACGAACCGCATGGAAGAACCAATCAATAG 1710 0.4211 MNTFFYHVLSGGWFMVFASCLIMAVSGSTYIFSLYSNEVKTSLGYDQSTLNLISFFKDLGANVGIISGLISEIAPPWAVLAIGATMNFLGYFMIWLSLTQRIAKPQVWQMCLYFYIGANSLPFANTGALVSCVKSFPQNRGTVIGLLKGYMGLSGAILTQLYHAFFGHDNLKALIFLIGWFPSAILFIFLPSARVLNPIPQPQHKELKVFYKFLYTSLGLAGFLMVLIILQKKFSFTRIEYVVDGMVVLFLLFLPLAVVFQEEFKLWKTQNQTFTDASPSTSSVELQLQSQERKVPCLSNILKPPNRGEDFTILQALLSIDMLILLLAAMLGIGGTLTALDNLGQIGNSLGYPRKSLTIFVSLVSIWNYLGRVVSGYASEILLTKYKFPRPLMFTIVMLLSCVGHLLIAFGIPNSLYFASVITGFCFGSVWPLMFSIISELFGLKHYSMLLNFGVTASPLGSYILNVRVTGYLYDKEAMKQLGMKGLTRQAGKELSCLGVECYRMAFIIITVSTLVGCFASFILVLRTREYYKGDIYKKFRGEPQITETFATLSSTNACHHEPHGRTNQ. 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05304 569 Pfam Nodulin-like 13 260 IPR010658 -
Seca8g05304 569 CDD MFS_Mch1p_like 11 518 - -
Seca8g05304 569 Gene3D MFS general substrate transporter like domains 315 533 IPR036259 -
Seca8g05304 569 SUPERFAMILY MFS general substrate transporter 16 533 IPR036259 -
Seca8g05304 569 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 13 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05304 Seca-Chr8 143634320 143636029 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05304 1 541 Nodulin-like Gene Family AT2G39210 58.423 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05304 - - gmx:100782396 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05304 8 143634320 143636029 Seca8g07923 8 176887413 176889272 ECH
Seca8g05304 8 143634320 143636029 Seca8g05304 8 143634320 143636029 ECH
Seca8g05304 8 143634320 143636029 Seca2g04691 2 133057868 133059739 PCT