Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05295 ATGAAAGTAAAAAACGGGAAGAAAAGACGTGAAGCAAAGCCTGAAACAAGGTGTTTATGTCCTGCAAAAATGAAGGTTCGGTTACATGAACCTTCTGGCCGTTGGAACGTGACCAAGTTTTGTGATGCCCATAACCATGACATGCTACCTCGCAAATACACAGGGATGTTACCTGCTCATAGGAAACTGAGTGAAGCTGACATCATGGAGATGAATAACATGCGAAATGCTGGTATTAGTACACCACAGATTTATTGGTCATTTGCTAGCCAATCGGGGGGTTACAACAATATTGGTTTTCGAAAAAGAGATCTTTACAATGAGATAGGTAGGCAAAGAATGTTGCAGTTGAGTGATGCAAAAGGTGCAATTAAGTATTTACGTGAAAGGGAGCCGAATGAAGGGTCAATATTTTGGAGGCACACGACTGATTGTGAAGGCCGACTCCAACGCTTGTTTTGGTGTGACGGTCCCTGCCAAGTTTATTACAAATTATTCGGTGATGTTCTTGCCTTTGATGCCACATACTGA 531 0.4218 MKVKNGKKRREAKPETRCLCPAKMKVRLHEPSGRWNVTKFCDAHNHDMLPRKYTGMLPAHRKLSEADIMEMNNMRNAGISTPQIYWSFASQSGGYNNIGFRKRDLYNEIGRQRMLQLSDAKGAIKYLREREPNEGSIFWRHTTDCEGRLQRLFWCDGPCQVYYKLFGDVLAFDATY. 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05295 176 PANTHER OS01G0519700 PROTEIN 7 171 - -
Seca8g05295 176 Pfam FAR1 DNA-binding domain 6 49 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05295 Seca-Chr8 143559891 143560421 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca8g05295 FAR1 6e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05295 - - mtr:112420123 201.83