Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05270 ATGTATACAAAGAGTCTGTCTACATATGGATACTGCATTTTGTGTAGTGCACTTCTTGTGTCTGCGTTGCACATATGTAATGTTCACAGTGTATATCTATGCTGTATAGCATTCTATTTATCTTTCAGAAACCCTTTTTGTGTTTCCCATCACTTACATAATTTGAAAAAGTTTTTTCGACTTCGGTACATGTTTCAGGAATGTTTTGATCCTATAGTTGATGCTGCTACTGGACGTGACCTTATTCCCACCATGGTTTATGGAAGGAATTTGCAGAATCAGGATTTTGGAGGAATGTATTGTGCATTATTAATGGTCAATTCATCTGTGGTATCTGCGGCCATGCTTCGAATCTTTGGTAGAGATATTGCAGAACTCCCTTTAGTTGCTACAAGAAATAAGAACCGTGGAAAGGGCTACTTCCAAACACTGTTTTCGTGCATTGAGAGGCTGCTTGCTTTCTTGAATGTGAAGAGCCTTGTACTACCGGCAGCTGAAGAAGCAGAATCCATATGGACAGATAAATTTGGGTTTAGCAAGATGAAACCTGACCAGCTTACCGAGTATAGAAAGAACTGCAATCAGATGATGGCATTCAAAGGGACAGTTATGCTTCATAAAACGGTGCCTCAATGTCGGGTCATCAATACTCAATCATGA 660 0.3955 MYTKSLSTYGYCILCSALLVSALHICNVHSVYLCCIAFYLSFRNPFCVSHHLHNLKKFFRLRYMFQECFDPIVDAATGRDLIPTMVYGRNLQNQDFGGMYCALLMVNSSVVSAAMLRIFGRDIAELPLVATRNKNRGKGYFQTLFSCIERLLAFLNVKSLVLPAAEEAESIWTDKFGFSKMKPDQLTEYRKNCNQMMAFKGTVMLHKTVPQCRVINTQS. 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05270 219 PANTHER AUTOIMMUNE REGULATOR 64 208 - -
Seca8g05270 219 Gene3D - 47 209 - -
Seca8g05270 219 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 92 182 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05270 Seca-Chr8 143245753 143247664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05270 64 216 PHD Transcription Factor Family AT2G36720 60.131 6.22e-61 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05270 - - gmx:100798276 279.641