Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05266 ATGCCTTGTTCACTCCCTCTCTCATCTCCCTCTCTCTTCCCTCCCTACAAAGCCACTCGTTTCCCTGTCACTCCAAAATCTTATCCACTTCACCGTCTCTCCGTGAAATCCTCAATTAACAAAAACCCGGACACCAGCACCAAGCCCAGTTCCTGGGTAAGCCCAGATTGGCTCACCTCCCTATCTAGGTCCCTCACCACAGGAAAAGACGATTCTGGCATTCCTGTAGCAAGTGCCAAGCTTGATGATGTTTCTGATCTTCTGGGTGGTGCCCTTTTTCTTCCTTTGTTCAAATGGATGAAAGAGTATGGCCCCATTTACCGTCTAGCTGCTGGCCCCAGAAACTTTGTTGTGGTTAGTGACCCCGCCATTGCCAAGCATGTGCTCAAGAATTATGGAAAATATGCCAAGGGTCTCGTTGCTGAGGTCTCAGAGTTCCTTTTTGGTTCCGGTTTTGCAATTGCTGAAGGTCCACTCTGGACGGCAAGGCGCAGGGCTGTGGTTCCATCTCTTCACAAGCGGTACTTGTCTCTTATAGTGGATAGGGTATTTTGTAGATGTGCTGAGAGATTAGTGGAGAAGCTACAATCTGATGCACTTAATGGAACTGCTGTTAACATGGAGGAAAAGTTTTCGCAGTTGACTCTTGATGTTATTGGTTTATCTGTATTCAACTACAACTTTGATTCACTTAATGCGGATAGTCCTGTTATTGGTGCTGTTTACACTGCATTGAAAGAGGCAGAGGCTCGATCAACTGATCTTTTGCCATATTGGAAGGCAAGTTCTTTCTCATTTCTCATTCATGATATGGATTTTCTTTCTGTTAACTTTCTTTGTAAGATAATCCCGAGACAAATAAAGGCTGAAAAGGCTGTTAGTGTTATCAGGAAAACTGTTGAAGATCTTATTGAAAAATGTAAAGAGATTGTAGAATCTGAGGGTGAAAGGATTGATGTTGATGAATATGTGAATGACACTGATCCTAGTATCCTCCGGTTCTTGCTCGCCAGCAGAGAAGAGGTTTCCAGTGCACAATTAAGAGATGATCTTTTGTCACTATTAGTTGCTGGTCATGAGACCACCGGTTCGGTGCTGACCTGGACACTTTATCTTCTAAGTAAGGATTCTTCCTCATTGGCAAAAGCACAAGAAGAGGTAGACAAAGTTTTACAGGGAAGGCGTCCTGCCTATGAAGATATTAAAGATCTTAAGTTCTTGACACGCTGCATTATTGAGTCACTCCGGCTCTATCCACACCCCCCTGTATTGATAAGAAGAGCTCAAGTTCCTGATGAGCTCCCTGGTGCTTACAAAGTCAATGCTGGTCAAGATATTATGATTTCTGTGTACAACATACACCATTCTTCTGAGGTTTGGGATAGGGCTGAAGAGTTTGTGCCAGAAAGATTTGATTTGGATGGTCCAATGCCAAATGAAACAAATACAGATTTCAGATTCATTCCATTCAGTGGAGGGCCCCGCAAGTGTGTTGGTGATCAGTTTGCTTTATTGGAAGCTATAGTTGCTCTTGCAATCTTTCTACAGCACATGAACTTTGAGTTGGTTCCTGATCAGAATATTAGTATGACTACAGGAGCAACAATACATACAACAAATGGCTTGTACATGAAACTCAGCCGACGGTTGAAATAG 1656 0.4324 MPCSLPLSSPSLFPPYKATRFPVTPKSYPLHRLSVKSSINKNPDTSTKPSSWVSPDWLTSLSRSLTTGKDDSGIPVASAKLDDVSDLLGGALFLPLFKWMKEYGPIYRLAAGPRNFVVVSDPAIAKHVLKNYGKYAKGLVAEVSEFLFGSGFAIAEGPLWTARRRAVVPSLHKRYLSLIVDRVFCRCAERLVEKLQSDALNGTAVNMEEKFSQLTLDVIGLSVFNYNFDSLNADSPVIGAVYTALKEAEARSTDLLPYWKASSFSFLIHDMDFLSVNFLCKIIPRQIKAEKAVSVIRKTVEDLIEKCKEIVESEGERIDVDEYVNDTDPSILRFLLASREEVSSAQLRDDLLSLLVAGHETTGSVLTWTLYLLSKDSSSLAKAQEEVDKVLQGRRPAYEDIKDLKFLTRCIIESLRLYPHPPVLIRRAQVPDELPGAYKVNAGQDIMISVYNIHHSSEVWDRAEEFVPERFDLDGPMPNETNTDFRFIPFSGGPRKCVGDQFALLEAIVALAIFLQHMNFELVPDQNISMTTGATIHTTNGLYMKLSRRLK. 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05266 551 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 490 499 IPR017972 GO:0005506|GO:0016705
Seca8g05266 551 Pfam Cytochrome P450 96 533 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05266 551 PANTHER CYTOCHROME P450 FAMILY 4 98 549 - -
Seca8g05266 551 Gene3D Cytochrome P450 75 551 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05266 551 PRINTS E-class P450 group I signature 449 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05266 551 PRINTS E-class P450 group I signature 497 520 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05266 551 PRINTS E-class P450 group I signature 346 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05266 551 PRINTS E-class P450 group I signature 366 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05266 551 PRINTS E-class P450 group I signature 100 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05266 551 PRINTS E-class P450 group I signature 214 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05266 551 PRINTS E-class P450 group I signature 487 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05266 551 PRINTS P450 superfamily signature 488 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05266 551 PRINTS P450 superfamily signature 357 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05266 551 PRINTS P450 superfamily signature 409 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05266 551 PRINTS P450 superfamily signature 497 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05266 551 CDD CYP97 94 543 - -
Seca8g05266 551 SUPERFAMILY Cytochrome P450 90 549 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05266 Seca-Chr8 143191149 143200341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05266 17 549 Cytochrome P450 AT3G53130 78.253 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05266 K09837 - gmx:100803324 930.628