Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05254 ATGGAACTCTCTCTATTCCGCCATCAGCAACATCCTATGCTTCTTCACTGCCCTCTCTTGACAAACTCCACAGGGACACACAACAAAAAACTTTACAGCAAAAGTTCATATAGGTTACCATGCCGCTGCTCATATTCTTCCTCCGATAAAACTGCTGCAGAACAACCAATCACAGTGTCTTTACAGATTGAAGGAAGAAGAGCATTACTCAGTTGTCTCCTCACAACTGTTGCTGGAGTTTATGCATGTGATGTGGCTGGAGCTGTTAGCACAAGTAGAAGAGCTCTTAGAGGAGCCAAAATTCCTGAAAGTGATTACACAACCTTGCCCAATGGTCTGAAGTACTATGATTTGAAGGTTGGGAGTGGAGCTGAGGCTGTAAAAGGATCCCGTGTTGCAGTTCACTATGTTGCTAAATGGAGGGGTATCACCTTTATGACTAGTAGACAAGGAATGGGCGTTGGAGGAGGAACGCCATATGGTTTTGATGTAGGCCAATCTGAGAGAGGAACGGTCCTTAAAGGGTTGGATTTTGGAGTACAGGGCATGCGAGTAGGAGGTCAGAGACTGTTAATTGTTCCTCCTGAACTTGCATATGGGAAGAAGGGAGTTCAAGAAATCCCTCCAAATGCAACAATAGAGGTGAATTATTCTGATCTCTCTGTTATGATTTGTTCCTGTAATTTGATACTACAATTAATTAACGTTTAA 711 0.4304 MELSLFRHQQHPMLLHCPLLTNSTGTHNKKLYSKSSYRLPCRCSYSSSDKTAAEQPITVSLQIEGRRALLSCLLTTVAGVYACDVAGAVSTSRRALRGAKIPESDYTTLPNGLKYYDLKVGSGAEAVKGSRVAVHYVAKWRGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDFGVQGMRVGGQRLLIVPPELAYGKKGVQEIPPNATIEVNYSDLSVMICSCNLILQLINV. 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05254 236 SUPERFAMILY FKBP-like 100 213 - -
Seca8g05254 236 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 125 214 IPR001179 GO:0003755
Seca8g05254 236 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP18, CHLOROPLASTIC 38 167 IPR044180 -
Seca8g05254 236 Gene3D - 89 223 IPR046357 GO:0003755
Seca8g05254 236 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 129 223 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05254 Seca-Chr8 143048335 143054018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05254 129 216 Calmodulin-binding Proteins AT5G48570 41.111 1.09e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05254 - - gmx:100815603 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05254 8 143048335 143054018 Seca8g05254 8 143048335 143054018 ECH