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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Seca8g05243
ATGGTTCTCAAGACCGAACTTTGCCGTTTCAGTGGGGCGAAAATCTACCCTGGGAAAGGCATCAGATTTATTCGTAGTGATTCTCAGGTCTTCCTGTTTGCTAACTCAAAATGCAAAAGGTATTTCCACAACAGGTTGAAGCCATCAAAGCTCACCTGGACTGCAATGTATAGGAAGCAACACAAGAAGGACATTGCCCAAGAAGCTGTGAAGAAGAGGCGCCGAGCAACCAAAAGGCCTTACTCTAGGTCCATTGTTGGTGCTACTTTGGAAGTTATTCAGAAAAGAAGAAGTGAGAAGCCAGAGGTTCGAGATGCTGCTAGAGAAGCTGCTCTTCGTGAAATTAAGGAGAGGGTCAAGAAAACAAAGGATGAGAAAAGAGCTAAGAAGGCAGAAACTCAGGCTAAGGTACAAAAATCACAAGGCAAAGGCGGTGTTGGCAAGGTGGCTGCACCCAAAGGTCCTAAGCTTGGCGGTGGAGGCGGGAAGCGCTGA
495
0.4707
MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKRPYSRSIVGATLEVIQKRRSEKPEVRDAAREAALREIKERVKKTKDEKRAKKAETQAKVQKSQGKGGVGKVAAPKGPKLGGGGGKR.
165
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Seca8g05243
164
Gene3D
-
69
139
-
-
Seca8g05243
164
CDD
Ribosomal_L24e_L24
3
56
IPR000988
-
Seca8g05243
164
ProSitePatterns
Ribosomal protein L24e signature.
10
27
IPR023442
-
Seca8g05243
164
Gene3D
Ribosomal protein L24e
3
64
IPR038630
-
Seca8g05243
164
PANTHER
60S RIBOSOMAL PROTEIN L24
4
142
IPR000988
-
Seca8g05243
164
MobiDBLite
consensus disorder prediction
117
136
-
-
Seca8g05243
164
Pfam
Ribosomal protein L24e
4
67
IPR000988
-
Seca8g05243
164
FunFam
60S ribosomal protein L24
3
64
-
-
Seca8g05243
164
MobiDBLite
consensus disorder prediction
117
164
-
-
Seca8g05243
164
SUPERFAMILY
Glucocorticoid receptor-like (DNA-binding domain)
6
58
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Seca8g05243
Seca-Chr8
142923601
142925818
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Seca8g05243
1
157
Cytoplasmic Ribosomal Protein Gene Family
AT2G36620
84.076
1.61e-86
249
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Seca8g05243
K02896
-
cpap:110822896
252.292
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Seca8g05243
8
142923601
142925818
Seca8g05243
8
142923601
142925818
ECH
Seca8g05243
8
142923601
142925818
Seca2g04743
2
133682532
133684933
PCT
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