Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05237 ATGATGAACCATGTCGTGTTCTTGTTCTTCTTCCTCTGCCTCTTCCTGTTACCATGTTTGACACTCAGTCTCCATCATAATGACACACACGCACTCACCATCTTCCGTAGCCAAACCGACACACATGGCCACCTTCTCTCCAACTGGACCGGCGGCGACGCATGCTCCGCCGCGTGGCGCGGCGTCGGTTGTTCCCCAAACGGCCGTGTCACTTCCCTCTCCCTTCCTTCCCTCAACCTCCGAGGACCGATCGACGCCCTCGCTCCTCTCTCCCACCTCCGCCTCCTTGATCTCCACGATAACCGCTTAAACGGCACCGTTTCACCTTCTTTCCTCTCTAACTGCACCAATCTCAAGCTTCTCTACCTCGCCGGAAACGACTTCTCCGGCGAGATCCCGCCGGAGATATCCTCCCTAAAAGGCCTCCTCCGTCTCGACCTCTCCGACAACAACATCGCCGGCGATATCCCCGACGAAGTTTCCCGTTTGTCTGAGCTCCTCACTCTGAGACTGCACAACAACGCACTCTCCGGCCACATCCCTGACCTCTCCGCCGCCATGCCGAACCTCACGGAGCTCAACATGACCAACAACGAGTTCTACGGTCGCTTACCCAACTCCATGATAAAAAAGTTCGGCGAAGTCAGTTTCTCCGGCAACGAGGGTCTATGCGGTGCAACACCATTCCCTGTTTGTTCCTTCACAGAGAACATTCCTTCTCCTCCTTCTGATGAACCGGTTCAGACCGTTCCTTCAAACCCGAGCTCGTTCCCTGAAACAAGCGTCATCGCTAGACCAGGAAGTCAACCCCGTAAAGGGTTGAGCCCTGGCGCTATTGTTGCCATTGTGGTGGCTAACTGTGTTGCGTTGTTGGTGGTTACGTCTTTTGTGGTGGCTCATTGTTGTGCAAGAGGGAGAGGGTCTAACTCTAACTCCATGGTGGGGAGTAGTGAGAAGAGGAAGAGTGGGAGCAGTTATGGGAGTGAGAAGAAAGTGTATGCAAGTGGTTATGGTGGTGATAGTGATGGGACTAGTGGCACTGACAGGAGCAAGCTTGTGTTTTTTGATAGGAGGAGTGAGTTTGAGTTGGAGGATCTGCTTCGTGCATCTGCAGAGATGCTTGGGAAGGGTAGTTTGGGAACGGTTTATAGAGCAGTTCTTGATGATGGTTGCACTGTGGCTGTGAAGAGGCTCAAAGATGCAAACCCTTGTCCCAGGCATGAGTTTGAGCAGTATATGGATGTCATTGGGAAGCTCAAGCACCCCAACATTGTTAGACTCAGAGCTTATTACTATGCCAAGGAAGAGAAGCTTCTTGTTTATGATTATCTCTCCAATGGAAGCTTGCATGCTCTTCTTCATGGGAACCGTGGTCCTGGGAGAATTCCATTGGATTGGACTACAAGAGTGAGCTTGGTGTTAGGGGCAGCAAGAGGGCTAGCTCGGATTCATGCAGAGTATAGTGCAGCTAAAGTGCCTCATGGGAATGTGAAATCTTCCAATGTGCTTCTTGACAAGAATGGTGTTGCTTGCATCTCTGATTTTGGGTTGTCACTCTTGTTGAACCCTGTTCATGCCATTGCAAGATTGGGAGGGTACAGGGCTCCTGAACAGGTAGAACAGAAGAGGCTGTCACAACAAGCTGATGTGTACAGTTTTGGGGTGTTGCTGTTGGAGGTTCTTACAGGGAGAGCCCCTTCTTTGCAGTACCCTTCCCCAGCTCGTCCTCGCATGGATGAAGAGGAACAAGGTGTGGATCTTCCCAAATGGGTTCGCTCAGTTGTGAAGGAAGAGTGGACTGCAGAGGTGTTTGATCAAGAACTCCTCCGCTACAAAAACATTGATGAAGAGCTTGTGGCAATGCTACATGTTGGGTTAGCTTGTGTGGTGCCACAGCCAGAGAAGAGGCCAACCATGGCAGAGGTTGTCAAGATGATTGAGGATATCAGGGTGGAACAATCTCCTCTTGGGGAGGACTATGATGAATCACGCAATTCACTTTCACCTTCACTTCCCACAACTGAAGATGGTCTAGCTTAG 2040 0.5108 MMNHVVFLFFFLCLFLLPCLTLSLHHNDTHALTIFRSQTDTHGHLLSNWTGGDACSAAWRGVGCSPNGRVTSLSLPSLNLRGPIDALAPLSHLRLLDLHDNRLNGTVSPSFLSNCTNLKLLYLAGNDFSGEIPPEISSLKGLLRLDLSDNNIAGDIPDEVSRLSELLTLRLHNNALSGHIPDLSAAMPNLTELNMTNNEFYGRLPNSMIKKFGEVSFSGNEGLCGATPFPVCSFTENIPSPPSDEPVQTVPSNPSSFPETSVIARPGSQPRKGLSPGAIVAIVVANCVALLVVTSFVVAHCCARGRGSNSNSMVGSSEKRKSGSSYGSEKKVYASGYGGDSDGTSGTDRSKLVFFDRRSEFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCPRHEFEQYMDVIGKLKHPNIVRLRAYYYAKEEKLLVYDYLSNGSLHALLHGNRGPGRIPLDWTTRVSLVLGAARGLARIHAEYSAAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYRAPEQVEQKRLSQQADVYSFGVLLLEVLTGRAPSLQYPSPARPRMDEEEQGVDLPKWVRSVVKEEWTAEVFDQELLRYKNIDEELVAMLHVGLACVVPQPEKRPTMAEVVKMIEDIRVEQSPLGEDYDESRNSLSPSLPTTEDGLA. 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05237 679 FunFam Leucine-rich repeat receptor-like kinase 27 132 - -
Seca8g05237 679 FunFam pollen receptor-like kinase 1 339 443 - -
Seca8g05237 679 MobiDBLite consensus disorder prediction 237 263 - -
Seca8g05237 679 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 651 IPR046959 -
Seca8g05237 679 SUPERFAMILY L domain-like 25 210 - -
Seca8g05237 679 MobiDBLite consensus disorder prediction 237 271 - -
Seca8g05237 679 Gene3D Phosphorylase Kinase; domain 1 343 443 - -
Seca8g05237 679 Gene3D Ribonuclease Inhibitor 140 238 IPR032675 -
Seca8g05237 679 MobiDBLite consensus disorder prediction 307 322 - -
Seca8g05237 679 SUPERFAMILY Protein kinase-like (PK-like) 372 646 IPR011009 -
Seca8g05237 679 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 444 658 - -
Seca8g05237 679 Pfam Protein kinase domain 372 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g05237 679 ProSiteProfiles Protein kinase domain profile. 368 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g05237 679 MobiDBLite consensus disorder prediction 654 679 - -
Seca8g05237 679 MobiDBLite consensus disorder prediction 307 328 - -
Seca8g05237 679 Gene3D Transferase(Phosphotransferase) domain 1 444 666 - -
Seca8g05237 679 Gene3D Ribonuclease Inhibitor 27 139 IPR032675 -
Seca8g05237 679 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Seca8g05237 679 CDD STKc_IRAK 374 649 - -
Seca8g05237 679 FunFam Leucine-rich repeat receptor protein kinase EMS1 133 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05237 Seca-Chr8 142848263 142850421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05237 21 675 Receptor kinase-like Gene Family AT2G36570 68.271 0.0 902
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Seca8g05237 Pkinase 4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05237 - - gmx:102660494 1049.65