Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05236 ATGTCCTGCATGTGGCGCAAGAATGCCTGTGGTGGCAGTGGGAAGAAACCGCCACTGGACGTGCCACGAGGCCACTTGGCCGTGATGGTGGGTGAAGCAAAGAGAAGGTTTGTGATAAGAGCTGACTACCTGAACCATCCACTGCTTCGACAACTGCTAGACCAGGCATATGAAGGCTATGGCTTCAACAAGAGTGGTCCTCTGGCTATACCTTGTGATGAGATCCTATTTGAAGATATTCTTCATTCCCTTGAAGGTAGAATACACCCACGCCGATCCTCTTCCCACGTGCCTACTAAAAAGCTAGATTTGAGCTTGTCCAAAGACTCGGTACCCCTACTTCAAGGCTTTGACAGCAAAAGGAAGAGCAACAACTAG 378 0.4947 MSCMWRKNACGGSGKKPPLDVPRGHLAVMVGEAKRRFVIRADYLNHPLLRQLLDQAYEGYGFNKSGPLAIPCDEILFEDILHSLEGRIHPRRSSSHVPTKKLDLSLSKDSVPLLQGFDSKRKSNN. 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05236 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 14 80 IPR003676 GO:0009733
Seca8g05236 125 Pfam Auxin responsive protein 15 84 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05236 Seca-Chr8 142802260 142802637 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05236 5 120 Calmodulin-binding Proteins AT4G34750 46.970 5.32e-29 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05236 K14488 - gmx:100777611 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05236 8 142802260 142802637 Seca8g05236 8 142802260 142802637 ECH