Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05226 ATGGAAATGCCTGCGAGAAGATCCAACTACTCGCTTCTTAGCCAAGTTCCCGATGACCAGTTTTCCGGCGCCGCCGGTGCGACCGGTCCTTCGTCTTCCGGCGACGGAAAAGCTAGTCGAGGCGGCAAGTTGGACCGAGGCTTCGATTGGGAGCTAGTCGGCGATCACAGGGTGGCTCAGCAGGGAAACAATCGGATCGGGAATTTGTACTCTTCGATCGGGTTGCAGAGGCAGTCAAGCGGGAGCAGCTTCGGCGAAAGCTCGCTCTCCGGCGGCGGCGAGTATTACGTACCGATGTTGTCGACGGCGGCCGCTAGCGAGGTCGATACCTTCGGATACCTGCACGACGAGGGATTCAGGGCTAGCGAGGCGAGGAACAAGTTGGCGGAGACTCCGGCGAGGACCGGCGGGTCTTCCGGGAAGAGCTGGGCGCAGCAGACGGAGGAGAGTTATCAGTTGCAGCTCGCTCTGGCGCTGCGGCTCTCGTCGGACGCAACGTGCGCCGATGATCCGAATTTCCTGGATCCGGTTCCGGATGAGTCCGCTCCGAGGCTCTCGTCTTCGCCGGAGGCGGTATCGCATAGATTCTGGGTGAATGGCTGCATATCATACTCTGACAAAATTCCTGATGGCTTTTACCTGATTCATGGGATGGATTCCTATGTCTGGACAGTATGCACTGATCTGCAGGAAAATGGCCGAATTCCTTCTGTTGATACACTAAAGTCTGTAAATCCCTCCATCGATTCTTCACTTGAAGTAGTTTTGGTGGATCGACGCAGTGACCCCAGCTTAAGAGAGCTGCAAAACAGAGTTCATGGCATTTCTTGTAGCAGCATAACACCAACGGAGGTTGTAGATCAGCTTTCCAAGCTGGTTTGCAACCGTATGGGGGGTTCAGCTTCTGTTGGGGAAGATGACTTTGTTTCTATCTGGAGGGATTGCAGTAATGATCTGAAAGATTGCTTAGGATCTGTTGTTGTTCCGATAGGTAGTCTGTCTGTTGGCCTGTGCAGGCATCGTGCTATATTATTCAAAGTACTAGCTGATGCCATTGATTTACCTTGTCGGATTGCAAGGGGCTGTAAATATTGCAAAAGAGATGATGCTTCATCTTGTCTTGTTCGATTTGGGCTTGACAGGGAATATCTTGTTGATTTAATTGGGAAGCCAGGATACTTATGCGAGCCTGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTTCTTCACCCTTGCGCTTTCCAAGACATAAACCAGCTGAACCTACCATTGATTTCAGGTCGCTGGCCAAACAATATTTCTCGGACTGTCTGTCTCTTGAGCTTGTCTTTGACAACAGTTCTGCAGACCAGTTTGATGGAAAATCCAATGACAGGAATAGCCATAGGCCAATATCAAATGAAAGCAACAGAAGTTCTCACTTTCCTCCACATCAACAAGCTTGTCATCCAAGCACACATGACCAAGGTTCTGAAATATATATATCATGTAACCCTCCTCAAAACATTATAGACTCGACAACAGTGGGCAAGTATCCACCGCCTTTAAAGCATAAGCGTCCTGTTGGTATACAAACCCCGTTAGCACTAACAAATGCCAATGATGACGTTATTGAGGGTAGGAGATTTGTTGAAGGAAGTCAACTGATCCCTAGCAAAGCTGCTCAAGAGATAGCCCTTGACATGGAGGATTTGAACATACCATGGAGTGATCTTGTGTTAAAAGAGAAAATAGGATCAGGTTCTTTTGGAACGGTACATCGTGCTGAGTGGAATGGCTCGGATGTTGCTGTGAAAATTTTGATGGAACAAGATTTTCACGTTGAACGCTTCAAGGAATTCCTGAGGGAGGTATGA 1860 0.4887 MEMPARRSNYSLLSQVPDDQFSGAAGATGPSSSGDGKASRGGKLDRGFDWELVGDHRVAQQGNNRIGNLYSSIGLQRQSSGSSFGESSLSGGGEYYVPMLSTAAASEVDTFGYLHDEGFRASEARNKLAETPARTGGSSGKSWAQQTEESYQLQLALALRLSSDATCADDPNFLDPVPDESAPRLSSSPEAVSHRFWVNGCISYSDKIPDGFYLIHGMDSYVWTVCTDLQENGRIPSVDTLKSVNPSIDSSLEVVLVDRRSDPSLRELQNRVHGISCSSITPTEVVDQLSKLVCNRMGGSASVGEDDFVSIWRDCSNDLKDCLGSVVVPIGSLSVGLCRHRAILFKVLADAIDLPCRIARGCKYCKRDDASSCLVRFGLDREYLVDLIGKPGYLCEPDSLLNGPSSISFSSPLRFPRHKPAEPTIDFRSLAKQYFSDCLSLELVFDNSSADQFDGKSNDRNSHRPISNESNRSSHFPPHQQACHPSTHDQGSEIYISCNPPQNIIDSTTVGKYPPPLKHKRPVGIQTPLALTNANDDVIEGRRFVEGSQLIPSKAAQEIALDMEDLNIPWSDLVLKEKIGSGSFGTVHRAEWNGSDVAVKILMEQDFHVERFKEFLREV. 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05226 619 SUPERFAMILY Protein kinase-like (PK-like) 559 619 IPR011009 -
Seca8g05226 619 MobiDBLite consensus disorder prediction 451 498 - -
Seca8g05226 619 MobiDBLite consensus disorder prediction 467 498 - -
Seca8g05226 619 Gene3D Phosphorylase Kinase; domain 1 566 619 - -
Seca8g05226 619 ProSitePatterns Protein kinases ATP-binding region signature. 579 600 IPR017441 GO:0005524
Seca8g05226 619 Pfam Ethylene-responsive protein kinase Le-CTR1 190 395 - -
Seca8g05226 619 MobiDBLite consensus disorder prediction 1 41 - -
Seca8g05226 619 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 3 252 398 - -
Seca8g05226 619 ProSiteProfiles Protein kinase domain profile. 573 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05226 Seca-Chr8 142571787 142583975 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05226 1 619 MAP Kinase Kinase Kinase AT5G03730 57.187 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05226 K14510 - gmx:100800648 994.186