Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05221 ATGAAGATGATAATAGAATGGTGTGTCTCTGCAAGTTCAACACGTGTCTGTGCCCCTCTCCCTTACACTAACTATCCTTGTAATTGTAACATGTTTGTAACTTGTTCAGCTTCATCTACAATTACAAGAAGACCTTTATCTCTGTCTCTCATCTCCACCACTTTCTCTGCATTCATCTTCTCACTTCCTCCTCCTCCTTCCTCTTCTTCTCCCTCTCCTTCTTCAAAATCCCCCATATCAGACTTCTCTGAGCTCCCCAATTCCGGTGGCGTGAAGGCTTTGGACCTCCTTGTTGGTTCAGGTGAAGTTCCCACAGATGGGGACCAGGTTGCAATTCACTACTATGGTAGGCTGGCAGCAAAACAAGGATGGCGCTTTGACTCAACTTATGACCACAAAGATGAGAATGGTGATCCTAATCCTTTTGTATTTGTCCTTGGGACTGGCAAGGTAAGCTTTAATTTATCAGTGGTGTACCATCTATTTAATTTAATCATATATATCAGAATCAAATGCTATGTTCAGGTTATTGCTGGCATTGAGGTGGCAGTGAGATCAATGAAAGTAGGTGGTATTCGTAGAGTCATCATACCTCCATCACTTGGGTATAAAAACACATCTCAGGAGCCCATCCCACCAAATTTCTTTGACAGGCAGAGGCTGTTCACTACTATTTTTAATCCAACTCGCCTTGCAAATGGTGAAGGCTCCACTTTAGGGACACTTATATTTGATATTGAACTCGTTAGCCTGAGGCATCAATGA 765 0.4261 MKMIIEWCVSASSTRVCAPLPYTNYPCNCNMFVTCSASSTITRRPLSLSLISTTFSAFIFSLPPPPSSSSPSPSSKSPISDFSELPNSGGVKALDLLVGSGEVPTDGDQVAIHYYGRLAAKQGWRFDSTYDHKDENGDPNPFVFVLGTGKVSFNLSVVYHLFNLIIYIRIKCYVQVIAGIEVAVRSMKVGGIRRVIIPPSLGYKNTSQEPIPPNFFDRQRLFTTIFNPTRLANGEGSTLGTLIFDIELVSLRHQ. 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05221 254 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-1, CHLOROPLASTIC 174 254 IPR044197 -
Seca8g05221 254 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 107 252 IPR001179 GO:0003755
Seca8g05221 254 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 103 249 IPR001179 GO:0003755
Seca8g05221 254 SUPERFAMILY FKBP-like 88 251 - -
Seca8g05221 254 Gene3D - 75 251 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05221 Seca-Chr8 142530808 142533479 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05221 79 252 Calmodulin-binding Proteins AT5G48570 28.000 8.07e-09 53.9