Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05215 ATGAAGATCGAGGAATTGGAGGATTCAGAGTGTAGTAGGGATGAAGAGGAGAAATACGAGAGGCAAATTGTGAGGGTTGATGCAACGATAGCGTTGGTCAGAGCAGGTGCTCGAATTTTGTTTTATCCGACGCTTTTGTATAATATGCTTCGTAACAAGATTGAAGTTGAGTTCCGGTGGTGGGATCAAATTGATGAGATTTTATTGCTCGGCGCAGTCCCGTTCCGCAAAGATGTTCCTCATTTGAAGAAGCTTGGGGTGGGTGGTGTGATTACTCTGAATGAACCTTATGAAACTTTGGTGCCGTCATCATTATATCATGTAAGTGTTGTCCTTTTTTTTCTTTTTAGATTGCTTTCTCTTTGCATTCTGTGTGCTACTTATATGTTATGA 393 0.4097 MKIEELEDSECSRDEEEKYERQIVRVDATIALVRAGARILFYPTLLYNMLRNKIEVEFRWWDQIDEILLLGAVPFRKDVPHLKKLGVGGVITLNEPYETLVPSSLYHVSVVLFFLFRLLSLCILCATYML. 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05215 130 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 107 - -
Seca8g05215 130 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 106 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05215 Seca-Chr8 142437706 142438294 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05215 31 106 Protein tyrosine phosphatase (PTP) family AT2G35680 76.316 4.42e-37 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05215 - - gmx:100817410 194.512