Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05200 ATGGAACTTGAACCTTTATCCACCACCTCTTTGCAGTTCTTCAGTGATGTCTCTTTTGGTTCTCTGATTTTCCCACTCATCCTCCTCCTCCTCCTGGTCTTCACCCCTACTCTTGCATCTCTCTTCCCCAGGATGAGTATGATCCTGTGCAGTTGTGAAACTTGCGAGGCTTACCTCACCTCAAGCTGGTCCAAAGATTTCGACAACCTGTGCGATTGGTACGCTCACCTTCTCCGAAACTCCCCCACCAAAACCATCCACATACACGTCCTCAGAAACACGATCACCGCAAATTCAGATAACGTTGAGTACATACTCAAGACCCGATTCGAAAACTACCCGAAAGGAAAAACCTTTTCCATGATCTTGGGTGATTTTCTGGGTCGTGGCATCTTCAACGTGGACGGTGAATTGTGGAGGTTTCAGAAGAAGATGGCAAGCTTGGAGCTCAACAAACACTCCATAAGAACCTTCGCCTTTGAGATTGTCAACTACGAAATCCAACATCGACTCATCCCTCTCCTCTTGTCAAAAGAAGATGTCTTGGATTTGCAAGATGTTTTCAGGAGATTCTCCTTTGACAGCATTTGTAGATTCTCCTTTGGGTTAGACCCTATGTGTCTTGAAAAATCCTTACCCATGTCTGAATTCGCTGTTTCGTTTGACTTGGCATCGAAACTATCCGCTGAGAGAGCCATGGCTGTGTCCCCACTGGTTTGGAAGATGAAGAGGTTGTTGAATCTAGGTAGCGAGAGAGAGCTAAAAGAAGCAGTTAGAATGATAAATATGTTAGCAAAAGAGGTGATAAACCAAAGACGAAAAATGGGGTTCAGTGAGCATAAAGACTTGTTGTCTCGGTTCATGAGTAGAGTCCATGATGACAAGTTTCTGAGAGACATTGTCATAAGTTTCCTATTGGCAGGTCGTGACACCGTGGCTTCAGCTCTCACAAGTTTCTTTTGGCTGTTAGCAAAACACCCAGAAGTTGAAACAGAGATTCTTGTAGAGGCAGATGAGGTAATTGGACCACATAATAAGGACCTCACAAACTATGAACAGCTTAAGCAGTTGCACTATTTGCAAGCAGCAGCACATGAAAGCATGAGATTGTTTCCCCCAATTCAATTTGATTCCAAATTCTGTTTAGAGGATGACGTGTTACCAGATGGGACGGAAGTGAAGAGTGGAACTAGGGTTACATACCATCCTTATGCGATGGGTAGGTTGGAGGAACTATGGGGCCCAGATTGTTTGGAGTTTAAGCCCAAAAGGTGGTTGAAGGATGGAGTGTTTCACCCTCAAAACCCATTCAAATACCCAATTTTTCAAGCAGGGCTTAGGGTCTGTATTGGTAAAGAAATGGCTCTTATGGAACTCAAAACCGTTGCGCTTACGTTGCTTCGAAACTTCCACATCGAATTGCTCATTCCCTTTCATGGTAACCCACGTTTCTCTCCTGGCCTCACTGCCACTTTCGGTTCAGGACTTCCAGCAAGAGTTCGTGAAAGAGTAACCAATCGTGATTTTGTGAATTAA 1536 0.444 MELEPLSTTSLQFFSDVSFGSLIFPLILLLLLVFTPTLASLFPRMSMILCSCETCEAYLTSSWSKDFDNLCDWYAHLLRNSPTKTIHIHVLRNTITANSDNVEYILKTRFENYPKGKTFSMILGDFLGRGIFNVDGELWRFQKKMASLELNKHSIRTFAFEIVNYEIQHRLIPLLLSKEDVLDLQDVFRRFSFDSICRFSFGLDPMCLEKSLPMSEFAVSFDLASKLSAERAMAVSPLVWKMKRLLNLGSERELKEAVRMINMLAKEVINQRRKMGFSEHKDLLSRFMSRVHDDKFLRDIVISFLLAGRDTVASALTSFFWLLAKHPEVETEILVEADEVIGPHNKDLTNYEQLKQLHYLQAAAHESMRLFPPIQFDSKFCLEDDVLPDGTEVKSGTRVTYHPYAMGRLEELWGPDCLEFKPKRWLKDGVFHPQNPFKYPIFQAGLRVCIGKEMALMELKTVALTLLRNFHIELLIPFHGNPRFSPGLTATFGSGLPARVRERVTNRDFVN. 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05200 511 Pfam Cytochrome P450 94 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05200 511 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05200 511 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05200 511 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05200 511 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05200 511 PANTHER CYTOCHROME P450 49 495 - -
Seca8g05200 511 SUPERFAMILY Cytochrome P450 68 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05200 511 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05200 511 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05200 511 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05200 511 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05200 511 Gene3D Cytochrome P450 60 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g05200 511 CDD CYP86A 82 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05200 Seca-Chr8 142141749 142143284 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05200 50 503 Cytochrome P450 AT2G27690 61.123 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05200 K20624 - gmx:102662117 758.059