Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g05199 ATGATGGACTTTCACAAGCAACTGTTGTTTTCCCTCTTATGTCTTTCCCTAGTACTCTCAGGACAAATGGGGCCGATAGCTGAGGCTCGCCCGAACCACCATCAGCAGCACGGTTATCCTTCAAAAAAATTGTTCGTTTTTGGGGACTCATACGCTGATACTGGCAACACCAGAAAAAATTCACTTGGCTCATGGAAACAACCGTATGGCATTACCTTTCCCGGAAAACCCGCCGGAAGATTCTCCGACAGTAGAGTCCTAATTGACTTCATTGCAAAGTATTCGGGACTGAGATCTCCACCACCCTACAAATTTAGGAAAGTGATGCCTCAATATTTGAAGCACGGGGTGAACTTTGCTTATGGTGGTACAGGTGTATTTGATACAGCAATCGCCATATACATCGATTTCTTCAACCACCTCATCCAAGAAAACGTATTCACTCCCTCAAATCTCACCAACTCCGTGGCTCTCGTCTCCGTCGCTGGAAATGACTACAATTTTTACTTGTCCACAAATGGCTCTGACCAGGGATTGTCGTCTTTCATCGCCACAGTGGTTAATCAAATCACAACCAATTTGATTCGACTCCAAAACTTAGGAGTGAAGAAAATTGTTGTGGATGGTTTAGAACCCCTAGGTTGCCTTCCTATTGCCACAGCCCCAACCGCGTTCAAGCTTTGCAATAGCACCTCTAACGACCTCGTTATTTTTCATAACAAACTCTTAAACCAATCGGTTACCAAGTTGAACCGACAAAGCAAGGATCACACCACCTTCGTCATTCTTGACCTTTACGACAGTTTCATGTCAGTGCTTAACGACCCATCCACCAATAACATTAAGGACCAACTCAAGCCATGCTGTGTTGGGGTAAGCAGCAAGTATTTCTGTGGGAGCGTTGACGAAAACAACGTGAAGAAGTATACGGTGTGTGAAAATCCCAAATCAGCTTTCTTTTGGGATCTTTTTCACCCAACGCAAGCAGGTTGGAATGCTGTCTATAACAAACTGCACAAGGGAGCTCTTCATCAACTTCAATACTAG 1047 0.4441 MMDFHKQLLFSLLCLSLVLSGQMGPIAEARPNHHQQHGYPSKKLFVFGDSYADTGNTRKNSLGSWKQPYGITFPGKPAGRFSDSRVLIDFIAKYSGLRSPPPYKFRKVMPQYLKHGVNFAYGGTGVFDTAIAIYIDFFNHLIQENVFTPSNLTNSVALVSVAGNDYNFYLSTNGSDQGLSSFIATVVNQITTNLIRLQNLGVKKIVVDGLEPLGCLPIATAPTAFKLCNSTSNDLVIFHNKLLNQSVTKLNRQSKDHTTFVILDLYDSFMSVLNDPSTNNIKDQLKPCCVGVSSKYFCGSVDENNVKKYTVCENPKSAFFWDLFHPTQAGWNAVYNKLHKGALHQLQY. 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g05199 348 SUPERFAMILY SGNH hydrolase 41 339 - -
Seca8g05199 348 Pfam GDSL-like Lipase/Acylhydrolase 44 337 IPR001087 GO:0016788
Seca8g05199 348 PANTHER OSJNBB0059K02.9 PROTEIN 16 345 - -
Seca8g05199 348 Gene3D SGNH hydrolase 30 342 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g05199 Seca-Chr8 142069558 142074935 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g05199 44 329 Acyl Lipid Metabolism Gene Families AT4G10950 27.619 7.03e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g05199 - - gmx:100800932 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05199 8 142069558 142074935 Seca8g05199 8 142069558 142074935 ECH
Seca8g05199 8 142069558 142074935 Seca2g04797 2 134478083 134482447 PCT